NONHSAT096227
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT096227 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
583 nt |
Genomic location |
chr4-:44631188..44653658 |
Exon number |
3 |
Exons |
44631188..44631565,44652002..44652118,44653571..44653658 |
Genome context |
|
Sequence |
000001 ATGTCATCTT TTCACCAATG GATTTGCTTA AAATTTCTCA CACAAAGCTA CATTTACTGG AGGATCTTTC TATAAAAAAT 000080
000081 AAACAGAGGA TGTCAAACTT GGCACAATTT GACTCTGATT TTTACCAATC TAATTTTACT ATTGATAACC AGGAGCAGAG 000160 000161 TGGTAATGAC TCTAATGCCT ATGGAAATCT TTATGGATCT AGAAAAACTT GGAATCCATT TTGATCACAT ATGGCAAAAA 000240 000241 ACTTTGACAG TGTTAAACCC AATGAAGCCA GTAGATGGCA GCATTATGAA TGAAACGGAC CTCACTGGAC CCATTCTTTT 000320 000321 TTGCGTAGCC CTGGGAGCCA CCTTGCTTCT GGTAATGTGT CACAGGAAGC ACCAGATTTT AATGCTTGTC CTTTCCAGTG 000400 000401 CTGGCTTTGA AGCAATCTGT ATAAATATAA GAGAAACTGT GTCACCTTAC ATAGTGAATT TTTTAAGTGA GAGAGAATAA 000480 000481 TTTAACCATA GTGACAAAAA TATGCTACCA TTATGCATTG CAACAGCTAA AAAGTATAAA TTTAAATAGA ATTTCAAAAA 000560 000561 TCAAGAAGCA GATCAAAGCA GGA |
Predicted Small Protein
Name | NONHSAT096227_smProtein_17:223 |
Length | 69 |
Molecular weight | 7929.6513 |
Aromaticity | 0.117647058824 |
Instability index | 45.1795588235 |
Isoelectric point | 6.00628662109 |
Runs | 11 |
Runs residual | 0.0212639109698 |
Runs probability | 0.0182749594515 |
Amino acid sequence | MDLLKISHTKLHLLEDLSIKNKQRMSNLAQFDSDFYQSNFTIDNQEQSGNDSNAYGNLYG SRKTWNPF |
Secondary structure | LLLEEELLLLHHHHHLLLHHHHHHHHHHHHLLLLHHHLLEEELLLLLLLLLLLLLLLLLL LLLLLLLL |
PRMN | - |
PiMo | - |