NONHSAT096387
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096387 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1307 nt |
Genomic location |
chr4-:53731498..53732916 |
Exon number |
2 |
Exons |
53731498..53731732,53731845..53732916 |
Genome context |
|
Sequence |
000001 GGAGGGGATG TGGCAGGTAG CCCCTGTTCA CTTGCTGTAA GATAAGTGTT TTAGTATTTC AGCCACCCTT AGGCACAACT 000080
000081 CAGCCAGGCC TAGGAAGCAA CCCAACGTCA TTGCCATGAA CCATTTACAC AAGTCACACC AAAATCAACT GACACATTTT 000160 000161 TTTCCTGATG GAACAGTTAA AAAAACAAAA AACTATACAG TCAAAGTCTG GGGTTGAAGA GCGTGAAGTT CACAGCTCCT 000240 000241 CCACACACGC CCAACTGAGC ATGCTCATCC TGTGAGGGGG AACCAGAGCC TTCCTGTAAA CCATGAGAGC TTACCAATGT 000320 000321 CTGGTATACA AAATATTCTG GCCCATAAAC TCAACCTGTT TTTGAGGGGT AGGGGATTTT CCATCTTGTA CATAAAGAAA 000400 000401 GAAATCTGGG TATCCTTCAG GTTAGAAAGG CATTCTGTAA GAATAGTGTT CCAGAGTTAC AAATCATACT GGTAAGAGAA 000480 000481 AAGCAATTCT TCCTCTTGGG GAAaaagagg aaaagaaaga agaaaagaga aaaaagaaaa aagggggaaa aaagaaagCC 000560 000561 TATCAATGCT TAATCTGTTC TTTCATTCCC ACTGTAAATC ACATCAATAC ATTTGGTGAA ACTGCAACGG ACCACCATTT 000640 000641 ACAAGGTAGT TGAATGCAGA AACCGAAACG ATTATGCCCC CTCCCCACTC TAAAGGAAAA GACACAGAGT ACATTTCACA 000720 000721 TATTCAGAGA GTGGCTCAGT GGGCTCTTTC AAGCCTCATC AATCCTGTCC CCCTGCTCAG AACAACACTT CCTTTTCTGT 000800 000801 AGCAGTTCCA CAGGCCCTCT TGGCCCTTCT GCTCCAGCCC TTTCTGGAAC CAGGAATCAT TGCCAATATT CAACGTTCCT 000880 000881 GCACTAGGAG AACCTCAGGC CCTCTTCCTG GGAAGACCAA ACCCCCTTGA GTGCTCCTCC TGCTTCAGAC GGAGGTGACA 000960 000961 GTCCTCACTT TGGCAGAGAG GGCTTGCTTA AACCTCCTCT TCAGGTCCTG CATGTTGGGT GACTTGGGCC TGGGAATGAG 001040 001041 GGAGGTTCTT CGCTTCTCGG GTGTACTGCT AGCTGCAGTC CAAGCTGAGG GTCAACCTGT TTGATGTGCA ACAGGTCAGC 001120 001121 TTTGTTGGCC ACGACCACCA CAGGCAGCCG GGTGCCCAGG TGTAGCTGCT GCACGTGCTG GTGGAGCTGG CTGATGAGTT 001200 001201 CATAGCTCTT GTAGTCAGTG ATGGAGAAAA CGATCACCAC AGCATCTGCC CAGCGAATGC ACCTATTCAG CTGTTCACTG 001280 001281 CAGCTCAGGC TGTTCTCATG GACCTGA |
Predicted Small Protein
Name | NONHSAT096387_smProtein_653:886 |
Length | 78 |
Molecular weight | 8596.7904 |
Aromaticity | 0.103896103896 |
Instability index | 52.6662337662 |
Isoelectric point | 9.16265869141 |
Runs | 7 |
Runs residual | 0.0451722190853 |
Runs probability | 0.043215484392 |
Amino acid sequence | MQKPKRLCPLPTLKEKTQSTFHIFREWLSGLFQASSILSPCSEQHFLFCSSSTGPLGPSA PALSGTRNHCQYSTFLH |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLLLEEEEELLLLLLLLLLL LLLLLLLLLLLLLEEEL |
PRMN | - |
PiMo | - |