NONHSAT097357
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097357 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1658 nt |
Genomic location |
chr4-:89375878..89377535 |
Exon number |
1 |
Exons |
89375878..89377535 |
Genome context |
|
Sequence |
000001 ccacccccCT CGTGCCCGCT CCGCTACGTA ttcccgtatt cccgggtgcc tggcaacagt gatgtgcttt aggccttttt 000080
000081 tagaatgcat acaaacggaa ccatatctaa gtgatgtctg gcttttttaa cttagcacaa tgctttgaga ttcatactat 000160 000161 tgtgtttaat tagtaattca tttgtgttat tgttgaatgg tagtctatca tatgggtaag ccacagttta tttatccatt 000240 000241 caccaattga tgggcctgtc ggttgtaggg aacaggagaa aacttcccct ttgccctctg aagggtcacc gaaaatcaac 000320 000321 tgacaaggct gggcctgggc tcctgcctgt aaccccagcc cttttttagc ccaaggcagg aggatctctt Ctttgtgaag 000400 000401 tgtgtattca aatcttttga ccatttattt attagctagc ttgacttttt atctaagagt tctttatata ttattgagtt 000480 000481 ctttatatgt ttcataccat gttctttatt agctatacgt tttgaaatgt tttctacctg tctgtggctt gcctcttcat 000560 000561 tttaagtgtc ttttgaagca ctgaagtttt caattttgat gtaatttatc catttttttc ttttacatag ttcatacctt 000640 000641 ttttgtccta cttaagacat ttttgctaaa ttcaagatta taagatttcc tcatttgtta ccttctggaa gttttataat 000720 000721 tgttggtctt cattatattt aaaatgaatt attctttata gtatcgatag atgctggagg cagataaggg agggtccctg 000800 000801 gagaatctct gacctgcctc acaagctttt gtgcagctga ggaagcctgc ccagggtctt gtctgggcat gcccacaagg 000880 000881 gacttggggg cccactgcac caggagagtg gggtgcagcc agagggaatt cagccttatg cagcagggat gagcaagaag 000960 000961 tcttcagctt gtgtgtgttg gcctgttatt cagtctgtga gctgggagcc tgttggcagg accctccttg tttttttgct 001040 001041 aagagctttt aataaatgcc actcttcacc ttgcaatgta ttcacatgcc taattgttcc tggtcatgag acaagaacct 001120 001121 ggattttagc tgagctaagg agcaaaaatt cctgcatcag tatgaggtaa gaataaaggt tctttttttt ccttatggat 001200 001201 ttccagtcgt tccagcttgc ctatccccat ggaattgcct tggcatccct gtcaaaactc agctggccgt atattataac 001280 001281 ctcagagcca gcccaaactg gccctactct gttgataaca aaatggccag ttaccctgta ggtataacag agccaaaact 001360 001361 gcaagttatg tagactgggc atgtgccatg gaaaaagctt tgacctctaa caatgaaacg ggaaaggttc ccttgtcccc 001440 001441 ttcgtagggc atgcggcagt gggagtgggt cgcttcttca gtgccccact gctcacacct ctaggggagc atacagacag 001520 001521 gcaggttttg gggctccaac cccacgccag tgtctagggg tggatgttta ctgctcctga agcaccagtg ggctgtgcta 001600 001601 ctgtgtgctt ttttagtttt gctgtctata ggcacttgtg ttaaccagct caattaga |
Predicted Small Protein
Name | NONHSAT097357_smProtein_1412:1579 |
Length | 56 |
Molecular weight | 5902.7355 |
Aromaticity | 0.0727272727273 |
Instability index | 51.3854545455 |
Isoelectric point | 9.63763427734 |
Runs | 7 |
Runs residual | 0.0242424242424 |
Runs probability | 0.0290079995962 |
Amino acid sequence | MKRERFPCPLRRACGSGSGSLLQCPTAHTSRGAYRQAGFGAPTPRQCLGVDVYCS |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLEEELLEEEEL |
PRMN | - |
PiMo | - |