NONHSAT098066
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098066 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1168 nt |
Genomic location |
chr4+:120375401..120376568 |
Exon number |
1 |
Exons |
120375401..120376568 |
Genome context |
|
Sequence |
000001 ctcaatctcg caggctggaa tgctgtgatg ggatcatagc tcactggagc cttgaaccgt tgggttcaTA CTTGAGGGCT 000080
000081 GGGGGGCTGA GCCCCCCTCA GCTGGGGGGA GCTGAGGTAG GACTACagag atggggttgc gccatgttgc taggctgctc 000160 000161 ttggcctgaa gggtcctccc gcctcggcGG CGCCAGACAT AGTTTTCTAT TTTTGACCAA CATAAACACT GTGCTGGGTC 000240 000241 TGAATTTTTC AGCTACCCTT CTTCGGCTGG CAACACACAG GACCTGGCGG GGAGGTCGCT CTTACCAGTC CCCACTCTGA 000320 000321 CGAGAAGACT GCCCAGCTCC AGGCACCGTA GGGCCCCAGT GACGTAGCCG AACACCCACG CCTCTGACGT CGCCAGAGGC 000400 000401 CCACCTCTAT GGTGTCGGCG AAGGCGCGCC ATTGTGACGT CACGGAAGGC GCGCTCTTGT GACGCCACGG AAGGCGCGCT 000480 000481 CTTGCGGCGT CACGGAAGGC GCGCTCTTGT GAGGTCGCAG GGGACCGCCA CTCACGCGGA GCCAATCGGA ACTCGCGGCG 000560 000561 GGGCTGCTGG GTCTTCCAGG AGCGCGCTTG AGCGGACGCT GCCTACCGGT GGCCGGGCGG GATGTAACCC GCTGCTGAGC 000640 000641 TGGCAGCTCT GTGTCGCTAG GCTTCGGCCC GGCCGCCGCC GCACATAAGC TGCGAGGAGG AGCTTTACGA CTTCCCGGTC 000720 000721 TTCGGGGCCG GGCGCAGCAA GGGCCAGACT CTGCGCTAGC AGGCGCTGCG CGCCAACCGG CCGGCACCTG TCGCAGAAGG 000800 000801 TGCAACCGAT CGCACTGTCG CGCCGAAGCT CCTCAATGGC CAGCGCCAGC TGCAGCCCCG GCCGCCCACT CGCCTCACCT 000880 000881 GAGCCTGGGT ACGTGCGCCC CACAACACCT CCCCCAGGCA GGGCCCGGGG ACCCCCGGGA GCGTCCCCGG CTACCTGGCG 000960 000961 CCGCTCATCC TGGGTAGGGT TGGCCCCCTC TGAGGCTGCC CGGCATGAGG GAGCTGCACC CCTGAGCTTG ACCTCTGACG 001040 001041 GCCCTTTGTA ATAGCATTAA GTCTTTGAAA CTTTGTAGCG GGGTAGAAGG GGCTAGGAAA CGAAGAAAAC ATCTTTTTAA 001120 001121 AAATATAAGC GGTCggctgg gcgaggtggc ccacgcctgt aatcccag |
Predicted Small Protein
Name | NONHSAT098066_smProtein_143:319 |
Length | 59 |
Molecular weight | 6419.3184 |
Aromaticity | 0.103448275862 |
Instability index | 48.5 |
Isoelectric point | 11.705871582 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0462815756935 |
Amino acid sequence | MLLGCSWPEGSSRLGGARHSFLFLTNINTVLGLNFSATLLRLATHRTWRGGRSYQSPL |
Secondary structure | LLLLLLLLLLLLLLLLLLEEEEELLLHHHHHLLLHHHHHHHHHHHHHHLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii |