NONHSAT098470
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098470 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1656 nt |
Genomic location |
chr4+:140346304..140347959 |
Exon number |
1 |
Exons |
140346304..140347959 |
Genome context |
|
Sequence |
000001 atcacagcac tatttatcta aatgatacct ctCattagaa cacttcttac cagtgggagg taaagggcag ggattgacta 000080
000081 gcaaggggca taagggaatt ttctgaagag cagtatatgg ttttttttga cagtttgtgt tacacaggta tatgcacttg 000160 000161 taaaaattta ccaaatattg tacttaagat ctgtgcattt tattgtatgt acattttaaa tacaaaaaag ctatagaaca 000240 000241 atactgaata ctaatgatga acatactaaa atgtttagtg gtgatgtcta caacttactc tgaaatgcat aaaaaatagg 000320 000321 attgatggat ggttaagtgg atagctatat gatacagtaa atataacaaa atgttctaga attaattggt aaatgtaaaa 000400 000401 gttcactgtg taattctttc aacttttctg tatgtttgaa caatttcaca aaatattagg GGGCAGGGAG TATTGCCTCt 000480 000481 acttttttcc ttcttttctt tctttctgag atttcaatta gtcatatgtg tgactttctt atccaagctt ccatctctta 000560 000561 atattgtttt catattttta cttccttgtc tctccttagt ataccctggg taatttttaa agatatcttc tcatttattt 000640 000641 tttaagagac aaggtctccc tcagtcgccc aagctggagc acagtggcat aatcatagca ctctgaagcc tcaaactcct 000720 000721 gggctcaagt catgctctgc tttagccttt tgagtagcta ggactacagg catacactaa catgcccagc taatttttaa 000800 000801 acttttttgt agagacaggg tctcaccatg ttgtccaggt tggtcttgaa ctcctagcct caagtgatcg tctcacctcg 000880 000881 gcctcccaaa gtgctgggat tataggcatg agccacctca gtggcttcat ttattaattc tctcttcatc tgtatcaaat 000960 000961 ttgctcttta acctttccac tgagttttgt tattctaaca attatatttt atatttctag aGCATCTCCC CATCTCCCAA 001040 001041 CTACCTTCCA ACCTGTCTGT CCATTCCTGG TAATCTCTTG CTCATCTTTA TAACATCCTT TACCTTTTAA AATATTCAGA 001120 001121 ACACAGAAAT TCTATACTTT TCATATCTGT CAATTCCACT ACCTACAGTC CTTGGAGTTA CACATCTACT GAAGTTTATT 001200 001201 TCTGCAGACA CTCATAGCAG TTTGGCTTTT TGGTGTAttt ttctctgtgt gctacagctt gaatagcttc tattgctatg 001280 001281 tcttcaaggt catcaatctt ttcttctaca ttaaatttgc tttaagctcc tacagtgatt taaatttttt tcagatattg 001360 001361 cattacataa gtctaaaagc tgcatttcat tgtttttcat atcttcattt tttcttatgt tcatattttc ttgtaaattc 001440 001441 ttaattatat tagtaatagc tgttttaatg gttttttttg tgctaattcc atgatctctg tcatttctga ttctattgac 001520 001521 tgatttttct tctggtatgg atcatatttt gttgaatctt catgtgtcta gtaatttttt attgtatagt tgtaactgct 001600 001601 acattgctta gtatcttgat gttgtgaagt tgtttccttc ttttacacag tgttga |
Predicted Small Protein
Name | NONHSAT098470_smProtein_116:235 |
Length | 40 |
Molecular weight | 4529.561 |
Aromaticity | 0.153846153846 |
Instability index | 52.7233333333 |
Isoelectric point | 8.70489501953 |
Runs | 7 |
Runs residual | 0.0107466063348 |
Runs probability | 0.0314684432331 |
Amino acid sequence | MVFFDSLCYTGICTCKNLPNIVLKICAFYCMYILNTKKL |
Secondary structure | LEEELLLLLLLEEELLLLHHHHHHHHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | ooooooooooooooooTTTTTTTTTTTTTTTTTTiiiii |