NONHSAT098994
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT098994 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2055 nt |
Genomic location |
chr4+:159191530..159199753 |
Exon number |
3 |
Exons |
159191530..159192715,159193221..159193325,159197930..159199753 |
Genome context |
|
Sequence |
000001 ATGTTCAATA AATAGTTATG GAATGTTTTC TTTTATCTGA TTAGTCATAT TTATAGTAGA TTCACTATTC ACTATTTAGA 000080
000081 TTCACTATTT ATCAATAACC TGCACTCAAT AGTTTTGGTG CATTCTTCTA ATTCTGTTTA TTTGTTTCCT GATAATAGAA 000160 000161 GTATCACATG CATTCTATAG ATAATTTGAA AGTATAAATG AGTATTAAAA AGAAAGCAAC CACATATCAT CCCCCAAACT 000240 000241 GAGATTATCA TTATTAACAT TTTAGTTTAT TTTCAAGCAT TTCCTAAGTA TATTTTAGTT ATTTAATCAT ATTATACAGT 000320 000321 ATTCAATATA TCTTTTATTT TTATAGAAGT ATTTTCTGTA TTATAAAACA TGCTACAAAA TGTTTTGATG GATATACAGC 000400 000401 ATTTCAATAT ATCAAAGTCA TAATTGCCCT AATCCTTTCT GATATCATTT GCATCTGTGT CCCCAGCAAA TCTTACACTC 000480 000481 AATTGTAATC CCCCATGTTG GAGGGGGACC TGGTAGGAGG GGATTGGATC ATGGGGGCAG AGTTCTAGTG AATGACTTAG 000560 000561 CACCATCCCT GCTTGGTACT ACATACAATA TCATTCTATC ACTTTTAAAG TGTGCTGTGA GACCTCACAC TTTTAAAAGT 000640 000641 TGTTTAAAAG TATGTAGCAC CTCCCACTTC TCTCTCTTGC TCCTGCTCCA GCCATGTCAG ATGGGTCTGC TTCCACTTCG 000720 000721 CCTTTGGCCA TCAGTAAAAG CTCCCTGAGG CTCCCCAGAA GCAGATGCTG CTGTGGTTCT TGTACAGCCT GCAGAACCAT 000800 000801 GAACCAAGTA AACCTTTCTT CTTTATGAAT TACCCAGTCT CAGGTATTTC TTTTTTTCTT CTGCACAAAT TAACCTTAGC 000880 000881 AGCTTAAGGT GTTTATTTAT AGCAATGTGA GAGCAGAGTA ACGCACTTTC CCAATCATAA GACACTTAGA TTGTTTCCAA 000960 000961 TCATCACGAT CTATAATGCT GTCATGAGTA CCTTTGTACT AAATCTTGTA AGCATCTCTA ATTCTTTTCT TATATTAGAG 001040 001041 TTTTGGAAGA TGAACTACAG AGTCAAAGAA TACAAACAAT TTTAAGACTT TTAATATGTA TTGTCGAGTT GATTTACGGT 001120 001121 TAAGTTTTAC CAACTTAAAC ACCCACAAGC ACTTGCTTCA CTGCACGGTC ATCAGCATTG TAGCTGGAAA TGGGAGAGCC 001200 001201 TGGGCTTCAT TCCTGGCCTA CTAAATCCAT AAGCAAGAGG AAAAAACAAC ACAATCAAGG GACAAACTAC ATCGTGTGAG 001280 001281 GCCAGCTCAG GCTGCTACTA CTCTGTCATC CTAAGAGAAG AATCTCTGAA ATTTTGACAG CATGTGGAAA TATTCCCACT 001360 001361 GATTATTGGA TTATGAAGAT GGAGAAGAGT ATTTTAAAGG AGTTTTGTAG GAGCTGCAGG AGAGGATTCA GGTATATTTA 001440 001441 TATTCATAGT ATATGTGTAA TGCTTTGTTC CTGCTCCTTC ATTACTTCTA TTAAGAAGAG ACAAGGAGAG AGACATGGAA 001520 001521 ATGACTAAGG CACCAAAGGA AAGGCATTTT TTACATTTCA AAGTCACAGG TAAAAAACAT TTATCATTTT CATGTGGAAA 001600 001601 CATTCTTCCA AGCTGTAACT AATAATGGTC TCTCCTACTA TTTCCTCCCA CTTCTGCAGC TGCTAAAACA CCTTTGCCAC 001680 001681 CAGCTCCGAC AATCAAACCA TGCCTTTGGA TTTCTTCAGT TTCTAAAGGG GAACATCTTT TTAAAGCCTT TGTTGTATTA 001760 001761 ATTAAGAATC CAGGGCCAAG CCCGTGGCTC ATGCCCATAA TCCCAGCACT TTGTGAGGCC AAGGCAGGTA GATCACCTGA 001840 001841 GGTCGGGAGT TCGAGACCAG CCTGACCAAC ATGGAGAAAC CCCGTATCTA TTAAAAATAC AAAATTAGCC AGGCATAGTG 001920 001921 GCATATGCCT GTAATCGCAG CTATTCAGGA GGCCGAGGCA GGAGAATCGC TTGAATATGG GAGGTGGAGG CTGTGGTGAG 002000 002001 CCGGGATCGT GCCATTGCAC TCCAGCCTGG GTGACAAGAG CGAAACTCTG TCACC |
Predicted Small Protein
Name | NONHSAT098994_smProtein_764:886 |
Length | 41 |
Molecular weight | 4749.5932 |
Aromaticity | 0.225 |
Instability index | 45.955 |
Isoelectric point | 8.23065185547 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0644383879677 |
Amino acid sequence | MLLWFLYSLQNHEPSKPFFFMNYPVSGISFFLLHKLTLAA |
Secondary structure | LHHHHHHHHHLLLLLLLEEEELLLLHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTo |