NONHSAT099819
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099819 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2073 nt |
Genomic location |
chr4+:190962497..190964569 |
Exon number |
1 |
Exons |
190962497..190964569 |
Genome context |
|
Sequence |
000001 CCTCCCCCTC CCCGAGCCCG AGCTGGCCCA GCGGAGAAGG AGGGCGGAGA AGCTGGAACC CGAACGCGGA GCTGCAGGCG 000080
000081 GCAGGTGCGG GAACGGGAGA AGCTATGGCC TCGCCCAGGA CGGCTGCTCA GAGCGACACG AGCAACCGCC AGGAGCTCCG 000160 000161 CACGCAGCTG GAAGAACTCA GTAACGTACT CCGCTGTGGG AGACATGGAG GTAATAAAAG TCTGATGTAG AAGTACTCGC 000240 000241 AGAGAACCAT GCTCCTTGGT CAATCTCAGA TTATTATTAT CAGACCTACC CTAATGACGT TAGTCTTCCA AATAAAGTGA 000320 000321 GTGACTGAAC TGTCAAATCA GCAAGATCAG GATATTGAAA GTCCTGCTTT GAATTCTAAC GACCAGTTAT AAGTAGAAAA 000400 000401 TGACACTCAC CCTGGTACTG ATAGGACAGC AAATGTTAAG TGTAGACAAG AGGGTCATCT GCCTCCAATT CACAGGAGCC 000480 000481 AGCATCTGCA TTAGCAGCAC AAGATACGTC CTTAGAAGGT TCGTCATTAG CTGGAAGTTT GAGAGCTGCA GCGGAAGCGG 000560 000561 CTTTGTCACA GACTGGATTT AGTGATGATG AAAATACTGG ACTGTATTTT GACCACAGCA CTGGTTTCTA TTAAGATTCT 000640 000641 GAGAATCAAA TATATTATGA TTTAATTTAT TACCACTGTG ATGTGGAAAG TTGTCGCTAT CGATTTCATT CTCGAGTAGA 000720 000721 TTTGCAACCT TATCAGACTT ATAGCACGAA ACAAAAACGA AAAATTGAGA AAAGAAAGGA TTCTTCTACA AAAAAACGAT 000800 000801 GAGGAAAAGG ATTTGAATTC AGAGGATCAA GAAGCCTTCA GTGTTGAACA TACAAGCTGC AACGGGAAAG ACAATTTCAC 000880 000881 AAATGTGAAA AAAAAAAAGC CAAAATAGGC ATTCATCACA AAAATAATCC CCAAAATTCA CTGTTCCATT TAGTGGAAAT 000960 000961 CCTATGGAAT CTCCTTTTAA TGAAAACATC TCAATTCATC TTTAAGGATG AGAAAATCAC AGAGACTGAT AGTGAACCAG 001040 001041 AAGAAGGTGA AATTACAGAC TCTCAGACCG AGGGTAGTTA TGATGAAGGC ATTACCAGTA AAGGCAATGC AACTGCAAAA 001120 001121 GATACTGAGG AGGAAGATGA GGAAAAAGTG TGGCCTCATA TATGAGAGTG ATTGTCATTA GATCACCTGT GCTACAGACA 001200 001201 GGATCATTCT TCATCATTAC TGCTGCAAAA CCTGCTACAA TTGGAAGAGA AAATGATATG GAGCATACTT TCCAAATCCC 001280 001281 TGAAGTTGGT GTAAGTTTCA TGCAGAAATC TATTTTGACC TTGACTTACA AAGTTATGTC CTTTTGGATC AGACAGTCAA 001360 001361 AATGGAACAA TTGTTAATGT AAAATGGATT GTTCAGCTGA AAACTAAATG TGAGCCTTAT GAACCTGAGC ATGGAGATAA 001440 001441 AGTGAAAGTT GGAGACACTG TGTTATCTTA TTACATTCAC ACTGGCAGTA ATAGCTGTGT TGGATGTGAA CCAGGGCAGG 001520 001521 TTAGAGCTCA CCTTTTCCTT GACAAGAAAG ATGAATCATT TGTTGGTCCA TCATTAACTA AGAAGGAAAC GAGTTGGAAA 001600 001601 GAAGAAAAGG ATTTTAAAAA TATACGAGTA AAATATGGTT TACAGAATAC AGACTACAAA GATGATAAGA TACTGGAGAA 001680 001681 TCAAAAATAT AAAGATAGAG CTGGAAAACA TAGGGAGCAG ATTGGAAGTG AAGGAAATTT CCAAAGAGAT GATGCTCCTG 001760 001761 CATCTGTTCA TTCTGAAATT ACTGATAGCA ACAAAGGTCA GAAGATGTTG AAAAAGATGT GTTGAAAACA GGAGAAGGCC 001840 001841 TGGGGAAGGA TGGTGGGAGA ATAAAAACTC CAGTACAGCT TCAGCCTTGG CAAACACATG CAGGATTGGA GACAGACAAA 001920 001921 CCATCCTCAA TTAAAGAGAC TCACCTTCTC CAAAACAAGA ACAACAACAA CTGGGACAAA GCTCAGGAGA GGTTTGCCGA 002000 002001 AAACTTTCCA GAAACTAAAC TTCCAAAAGA TGACCTAGGA ACCATTCCTT GGGTAAAAGG GACTGAGGAG TGA |
Predicted Small Protein
Name | NONHSAT099819_smProtein_1634:1810 |
Length | 59 |
Molecular weight | 7105.704 |
Aromaticity | 0.0689655172414 |
Instability index | 40.9344827586 |
Isoelectric point | 10.2871704102 |
Runs | 7 |
Runs residual | 0.035903751421 |
Runs probability | 0.0285789991673 |
Amino acid sequence | MVYRIQTTKMIRYWRIKNIKIELENIGSRLEVKEISKEMMLLHLFILKLLIATKVRRC |
Secondary structure | LEEEEELLHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |