NONHSAT100718
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100718 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1329 nt |
Genomic location |
chr5+:21581201..21582529 |
Exon number |
1 |
Exons |
21581201..21582529 |
Genome context |
|
Sequence |
000001 ACCTGGGGGC TACACCTATG AAGAATGTAC AAAAGCACCA CAACAAATGA TCTAGTCTTC TGCAAAATAA GAACAGCATG 000080
000081 TAAACAGTTT GGTAGAGTGA ACCGAATCAA ACAAAAGGAA AATACTGTTT GTTTGTTTTT TTGCCACATC CTTGTTTTAG 000160 000161 ATTACCCTCC TCTATGCTTC TATAAGAATA TCTGTTTTTC TTATTGTAAA ATTTATTTTC CTTTATTGCA AGCATCTGTT 000240 000241 TATTTCTTGA GACAAATATA TACAGATCCT AATTTCTGGA CCCTGTGCAT GTTACTTTAC ATGGTGCTAT GATTTAAATG 000320 000321 TTTGTCCCCT CCAAAATTAA TGTTGAAATT TATTTGCCAC TTCAATGGTA TTAAGAGGTA AGACATTTAA GAAGTGATTA 000400 000401 GGACATAAAG GCCCTGCCTT CATAGCTGGG ATCAAAACAT CATAAAAGAG CGAGTTGGGT TCCTTCTTGC TCTCTCACCC 000480 000481 TTTGCCTTGT GCCATGTGAT GATACAGAAA GAAAATCATC ATTAGAAACC AGAACTTGAT ATTTCCAGAC TCCAGAACAG 000560 000561 TGAGCCAATA AATTTTTGCA CATTATGATT TACCCAGTCT GTGGTGTACT GTTACAGCAG CTCAAACGTA CTGAGATATA 000640 000641 TGGCAAAGAA GACTTTGCTG ATGTCATTAA ATCAACACTC TTGCAATGGA GAGATAATCT TGAATTACAT ACATAGCCTT 000720 000721 GATATAATCA TAATAACCGT TGCAGGTAGA ACAGAGGACT GAGAGTCAGC AGAGAGGGTG ATAGGAAACA GAGACTGGAA 000800 000801 TAATACATTT TAAAGATGGA AGAAGGAGCC ACAAGCCAAG AAATACAGGT AGCTACTGTT ACCTGAAAAA GGCGAGGAAA 000880 000881 TGGATTCTCC TCTCAGAGCC TCCAGGAAGA GCCAGTCCAT CTGACATTTT ACTTTAACCC AGTAAAACTA ATTTTGGACT 000960 000961 TCTGACTTCC ATAACTTAAG ATAATAAATT CATGTTATTT TAAGCCACTT AGTGTGTGGT AACTTTTCAC AACAGCAATT 001040 001041 GGAAATTAAC ATCCCTCTTT AACTTTCCAC GTCCTTCACT ATACTATAAG CTTTGTGCAA AGTAGAATAA AGGTAATTTC 001120 001121 TATCTCATTC ATTTTTTAAG TTTTAAATCA CAATATCTGC AGAGAATGGC AAAATGCTTG GTACATGGTA TGTATTCAAT 001200 001201 ACTCAATGCA TCTTTCATTA ATTAAATGAC CACCTTTCTT AAGAATAAAG AGACAGTTAA AATTCAGAAC ATTGAATTCA 001280 001281 ACAATGAGCT TCTTTTAGAC ATAACTCAGC TAAAAGATAT TAGGTGTAT |
Predicted Small Protein
Name | NONHSAT100718_smProtein_584:715 |
Length | 44 |
Molecular weight | 5078.86 |
Aromaticity | 0.093023255814 |
Instability index | 44.3976744186 |
Isoelectric point | 5.56378173828 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.00733086027204 |
Amino acid sequence | MIYPVCGVLLQQLKRTEIYGKEDFADVIKSTLLQWRDNLELHT |
Secondary structure | LEELLHHHHHHHHHHHHLLLHHHHHHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |