NONHSAT100834
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT100834 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1294 nt |
Genomic location |
chr5-:29105675..29106968 |
Exon number |
1 |
Exons |
29105675..29106968 |
Genome context |
|
Sequence |
000001 AGAAGCAAGA GCAGAGGCAA GGACCAGAAA AAACTGAAAA TCTGAAAAAG CAACTGACTG AAATAAAGGA AAAATCCCAG 000080
000081 GAGGAGAAAG GAAAACTGAA ACAAAAGTAC ACTGTGCAAA TAAATAAGCT GGAGGAATAG TTCCATTAAA AAATCCGAAG 000160 000161 GAATTAGCCT TATTCAGACA GAGCTGAAAA CAATAAACAA GAAAGAATAA GATGTTCTAA AGAAGAATTT AAAGAACAAT 000240 000241 TAATAGAAAC ATAAGGAGAC TGTTAGGACC TGGGAAGGCA TGGTTTTTGA AGAAAATCAT CGACTAGAAC AAAAGGCTGA 000320 000321 AAAAAGACAA TGCTGGCGAT GAGATCCCAT CATGAAGTTG TCGTGCAATT GAACAATGAT GGAAAAAATG TGTTTAAAGA 000400 000401 GAGTAGTTAT CTCCAGAATG CTCTTGCATA CCACCTGAAA GAAGTTTATG CTCTACAAAA ACGCTCCCAG AAGTTGCAAT 000480 000481 AGAATCAAAT CCTTTTACAT CAAAAGGAGA TTAATGAGCT CTTGGTTAAG GAAAAGATTA TGCAGCTTAC CCAGTAGAAA 000560 000561 ACACAAATCC AAACACTTCA GAAGAAGGTA GTAAGGTTGG AGACTGCTCT AAGTTATAGG ACCAGAGTTT GAGACTGAAG 000640 000641 TGTTAAAACT GTAGCAACAG CAATGATAGA GAACCAATCA GGTTACGTAT AAACTGACAA GCAGTAGCAA AGTCAGGTGA 000720 000721 ACAAAAGAAA AATGAATTGA GTGAAGAAGC TGGCCAAGAA CATGCTAGGT GAGAGAACAG CATTGGACAG TTCTTTTTTA 000800 000801 AATGCCCTAC ACCAAGTGAA ATAACAGATC CTATTTATCA GGAAGCATTT AAATTGAAAG CACAAGGGGC TTTCAATTAC 000880 000881 AAATGAGATC AGCACTTACA GGAAGAATGG AATATCCCCA AATCAGAACA ATTGATGACA GAGAGCACAG CATCAATAGT 000960 000961 GAAACGGGCT CTTACAGAGA CAGAAATAGA CAAGTATTGA AGGAAATATG AATATTGGAG ATTTGATCTG GGAGCAGAAT 001040 001041 GAGAAAGTAA TGAAATTTCT CTTTGCAAAA ATAAACAGTT TTGTTTCTAG GAAATTTAGT CAGATTTCTA GACCTCTAGT 001120 001121 TCCAGGCTGT GTTGTCTCTG ACGGTGGAGA AAAAAAAAAA ATTGAGGAAT GAAAGTAAGC TTCAAGATCC AACTTTCATC 001200 001201 ACCTGGCAAA TTCCACTATC AGACTCTTTT CGTGAAATGA TGTTTCCCAA TATTTTGGAA AGAAAAAATT ACAAGTGTCT 001280 001281 GACACAGGGA CCTT |
Predicted Small Protein
Name | NONHSAT100834_smProtein_1007:1171 |
Length | 55 |
Molecular weight | 6172.1596 |
Aromaticity | 0.0925925925926 |
Instability index | 48.3018518519 |
Isoelectric point | 8.93072509766 |
Runs | 9 |
Runs residual | 0.00397470641373 |
Runs probability | 0.0470077921059 |
Amino acid sequence | MNIGDLIWEQNEKVMKFLFAKINSFVSRKFSQISRPLVPGCVVSDGGEKKKIEE |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLEELLLLLLLEEELLLLEEEEELL |
PRMN | - |
PiMo | - |