NONHSAT101014
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101014 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1754 nt |
Genomic location |
chr5-:35723089..35746487 |
Exon number |
5 |
Exons |
35723089..35723319,35725981..35726070,35727359..35727509,35745202..35745664,35745672..35746487 |
Genome context |
|
Sequence |
000001 CTCTGGTGCC TCCCTGATTA GCTTAATAAC TAACCTCCTG AATTCTTTTT CAGATAAATC AGGGATTTCT TGGTTTGGAT 000080
000081 CCATTGCTGG TGAACTAGTG TGATTTTTTC ACGGTGTTAA AGAGCCTTGT TTTGTCATAT TACCAGGGCT GATTTTTTGG 000160 000161 TTCCTTCTCA TTTGGGTAGG CTCTGCAAAG GGAAGGTCTA GGGCTGAAAG CTCTTGTTCA GATTCTTTTG TCCCACAGGG 000240 000241 TGTTCCCTTG ATGTAATACT CTCCTGCTTT TCCTATGGAT GTGGCTTCCT GTGAGCCAAA CTGCAGTGAT TGTTGTCTGT 000320 000321 CTTCTGGGTT TAGCCACCCA GTAAGTCTAC CCTGCTCCGG GTTGGTACTG GGGGTTGTCT GCACAGAGTC CTGTGATGTG 000400 000401 AATTGTCTAT GGGTCTCCCA GCCATGGATA CCAGTGCCTG TTCTGGTGGA GGTGGTGAGG GAGTGCAATG GACTCCATGA 000480 000481 CAGTTCTTAG CCTTGATGGT TTAATGGTCT ATTTTTGTGC TGGTTGGCAT CCTGCCAGGA GGTGGTGCTT TCCAGAGAGC 000560 000561 ATCAGCTGTA GTAGCGTGGA GAGGGACCAG CGGTGGGCTG GGCCCTAGAA CTCCCAAGAT TATATGCCCT TTGTCTTCCA 000640 000641 CTACCAGGGT GGGTAGGAAA GGACCATCAG GTGTGGCAGA GCTAAGCATG TCTGAGCTCA GATTCTCCTT GGGTGGGTTT 000720 000721 TGCTGCAGCT GCTGTCGGGG TTGGGGGTGA GATTCCCAGG TCACTGGAGT TATGCACCTA GGAGGATTGT GGCTGCCTCT 000800 000801 GCTGAGTCAT GTAGGTTGTC AGGGAAGTGG GGGAAAGCTG GCAGTCACAG CCTCACGCAG CTCCCATGCA AACCTAAGGG 000880 000881 CCGGTCTCAC TCCCACCGGG CCTCTGCCAA CAGCCCCGAG TCTGTTTCCA GGCAGTGGGT GAGATGGGCT TGAGAACTTG 000960 000961 TTCAAGGATA CCCACCTCCG AGCTGTGAAA GAAAAGGGCT TGGGTCTTCC CCTACCTGAG GAGTCTGCAC ACCGGATGTG 001040 001041 CACCCTCCCC CGAGCTCTGG CCGGGAGGCT TCTTGCCCAG TTCAAATTGT TACAAGGTTC AGCTAGAGAT TTTCTTCTCC 001120 001121 CTGTGGAGTT TTACCCCCTG CTCCTCTGGC CACCCTCCCA ATGGAACCCT GTGATGCCCA GCAGGAATGG GCTGCTTGGG 001200 001201 CACCCAGCGA GCTCCCAGTG CCTTTCTGCT ACTTCCTCTA CCCCTGTATT TCGCTCAGCT CTCTAAATTG ACTCAGCTCC 001280 001281 AGAATGAACA CGTGACTTTT ATAAAGTTTA GACTCTAGAA CAAACTGTAT TCCACTTACT ATTTCAAAAA CTGGCAAATT 001360 001361 AAACTCTCCA CCTTGAATGA GAAAGAAGGT AGCTAGAACA TGAGTGGTGC TCTTGGTATC CCTTGGAGAC CAGAGTTGGA 001440 001441 TCATTGAGTC CTCAGTGTAA CTATTCCTCA TGCTCATGGA TGAAAAGTTT GGAAAATAAT CTATGGATTA GCATATGGTG 001520 001521 AAGATCCTTC AAATTAAATG GCATTAATGA GACAGCCAGG TGGGAGGGGG TCCCTGGACC AGCCTGCTCA CTGGGGTGAA 001600 001601 GCCTTGGGAA GTTCATGCCA TTTGTGTGGG GAGGAGCCTG GCCCCTCTTT TTCCTGTGTG GAACCTGGGA TTCAAACTGC 001680 001681 CTGGCCTTGC AAGAGTTCCT GTTTCCCTCT TTTTTCCGTT TTAACCCAAT AAAACCCTGC TTTATTCACC CTTT |
Predicted Small Protein
Name | NONHSAT101014_smProtein_467:607 |
Length | 47 |
Molecular weight | 5280.0083 |
Aromaticity | 0.130434782609 |
Instability index | 80.6108695652 |
Isoelectric point | 5.49737548828 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0285285285286 |
Amino acid sequence | MDSMTVLSLDGLMVYFCAGWHPARRWCFPESISCSSVERDQRWAGP |
Secondary structure | LLLEEEELLLLEEEEEELLLLLLLLLLLLLLLEELLLLHHHHHLLL |
PRMN | - |
PiMo | - |