NONHSAT101187
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101187 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
637 nt |
Genomic location |
chr5+:41925423..41930257 |
Exon number |
2 |
Exons |
41925423..41925600,41929799..41930257 |
Genome context |
|
Sequence |
000001 CGAGCCGCGC AGCGGAACAA ACTCGCCGCC GCCGCCCTTC AGCGACTGGG GCCGCCTGGA GGCGGCCATC CTCAGCGGCT 000080
000081 GGAAGACCTT CTGGCAGTCA GTGAGCAAGG AGAGGGTGGC GCGTACGACC TCACGGGAGG AGGTGGATGA GGCGGCCAGC 000160 000161 ACCCTGACGC GGCTGCCGCT ATAGAATGTG CTGTCCATAC ACAAGAAGAG CTTCAAAATC CAGCCGTCCT ATGTATGGAG 000240 000241 CTGTCACTTC TTTTTTACAC TCCCTGATCA TTCAGAATGA ACCACGATTT GCTATGTTTG GACCAGGTTT GGAAGAATTG 000320 000321 AATACCTCTT TGGTGTTGAG CTTGATGTCT TCAGAGGAAC TTTGCCCAAC AGCTGGTTTG CCTCAGAGGC AGATTGATGG 000400 000401 TAATTTTCAT GTTAATCTAC AGTTAATTCA AACACTTTGA GCTTGACATT CTTGTTAAAA AGAAAGAAAT TCATTTTAAA 000480 000481 TTAATTATTT GCTATAATGA AGTACAGTAC TTTGGTTGTT GGGAGCCCTA CCAGGTTCCA CTGAACTGAC AGAATTAATT 000560 000561 TACTTACTAT AAGAAAGCTT CCTCTTAATT CCTCAAATTT GTACAATCCA GCCTTTAAGA TTATGTGAAA ATAAATT |
Predicted Small Protein
Name | NONHSAT101187_smProtein_185:439 |
Length | 85 |
Molecular weight | 9357.7519 |
Aromaticity | 0.0714285714286 |
Instability index | 51.9654761905 |
Isoelectric point | 6.70050048828 |
Runs | 12 |
Runs residual | 0.00887170154686 |
Runs probability | 0.038575340046 |
Amino acid sequence | MCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFAMFGPGLEELNTSLVLSLMSSEELC PTAGLPQRQIDGNFHVNLQLIQTL |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLEEELLLLHHHHLHHHHHLLLLLLLLL LLLLLLLLLLLLLEEEEHHHHHLL |
PRMN | - |
PiMo | - |