NONHSAT101786
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT101786 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1214 nt |
Genomic location |
chr5+:65500953..65510459 |
Exon number |
2 |
Exons |
65500953..65501505,65509799..65510459 |
Genome context |
|
Sequence |
000001 TTAAAAAACA GAAATTTATT CTCTCAAAGT TCTGGCTAGA AGTCTGAAGT CAAGGTGTCA GTAGGTCCAC GCTGTCTCTG 000080
000081 AAGGCTCAAG GTGGGAGTCC GTTCCACGCC TTTCTCTTAG CTTTTGGTGT TGCCAGCAAT CCTTGATGTT ACTTGGCTTA 000160 000161 TAGACACAGC TCTCCAATCT CTGCTTCCAT TGTCACATGA CATTCTCCTG GTGTGTGCCC TTGTGTATCT CTTCCTCTTC 000240 000241 TTATAATGAC ACCAGTCATA TTGGATTAAG GGCCCATCCT ACTCTAGTAT GACCTGATCT TAACTAATTA TATCTGCAAA 000320 000321 GACCCTATTT CCAAATAAGA TCACATTCGT AGATACCAGG GTTAGGGCTT GAGCATCTCT TTTTGGGGAA CACAATTCTA 000400 000401 CCCACTGCAG CATGTACCCC TACTGCTTCT ATGAATACAG AACTCTACAG GCTGTCATTA ATTGCCAAAG CTTTCTGTGA 000480 000481 GGCTCTTTTT GTTAGGTAAA AGTAGGATGC AGATGCAGGG TACAGTCACA TACACACACC ATTACTGACC TCATATTCCC 000560 000561 CCAAGAAAGC TGGGTTTTAT TGACCCTGCT CTGTTGTTCA CTCCCACAAC TGCGTCCGCA TTCAGGGCCA AGTGCTTGGA 000640 000641 GGACAGAGAG AAAAGGCCAA TGGGGATTTG CCCCACCTTT TGGTACTATT GCTCCTCTGA TTAGAGAAGA ACATTCCCCT 000720 000721 CCCTAACAGT TTTAGGTGTC TGGGGCCCCC TTTGCCACCA TGGTCTACCA GGACACCTGT TTACAGTTCC TGAAACTTGG 000800 000801 AACACTGCAC TGATGCCCAC TTCTCCTCTC TCCACCCCTT CACTCTTTCC ACCCCACTAA GGCCAGGCAA GGTTATTCTG 000880 000881 GAGTTTAAAC AAAATGGTAA GCTCTCCACT GGTTTGGTGG TGCTTCGAGA GCTGATCCTC CTCCCCAGTC CTTTTCTGTT 000960 000961 TTTCAGAGTT CCTAAGTTGC ATTCTGTTCA AGTTTTATAA CTATATTCAG TGGGGGAGAG CCAGAGGGGT CTTGCTTATG 001040 001041 TCATTTTCCC TAGAACTGGA ACCCCACTAC CCAGAAATCA ACACTGCCAA TATTTTGGAG TCTTTTTGTC CAGTGTATAT 001120 001121 TCTGGACACA CACACTCACT GTTGAAATCA CACCCTATGT ACAGTTTAGT CATTTACTTC TTTCAATATC ATTGTGAGAA 001200 001201 GTTTCCAAAA TATT |
Predicted Small Protein
Name | NONHSAT101786_smProtein_1037:1144 |
Length | 36 |
Molecular weight | 4065.5589 |
Aromaticity | 0.114285714286 |
Instability index | 83.36 |
Isoelectric point | 4.54705810547 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.0292603527898 |
Amino acid sequence | MSFSLELEPHYPEINTANILESFCPVYILDTHTHC |
Secondary structure | LLEEEELLLLLLLLLLHHHHHHLLLEEEELLLLLL |
PRMN | - |
PiMo | - |