NONHSAT102689
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102689 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
582 nt |
Genomic location |
chr5-:88119678..88179041 |
Exon number |
3 |
Exons |
88119678..88119744,88135196..88135440,88178772..88179041 |
Genome context |
|
Sequence |
000001 acacgcacac ATCGTCTCCA GCTCTCTGCT CGCTCTGCTC GCAGTCACAG ACACTTGAGC ACACGCGTAC ACCCAGACAT 000080
000081 CTTCGGGCTG CTATTGGATT GACTTTGAAG GTTCTGTGTG GGTCGCCGTG GCTGCATGTT TGAATCAGGT GGAGAAGCAC 000160 000161 TTCAACGCTG GACGAAGTAA AGATTATTGT TGTTATTTTT TTTTTCTCTC TCTCTCTCTC TTAAGAAAGG AAAATATCCC 000240 000241 AAGGACTAAT CTGATCGGGT CTTCCTTCAT AACACTTATT ACTGGACCCA CAAACATACC TGAGGGACAC GGACATAAAA 000320 000321 ATTATCCTAG AGGTGTCTTC ACTTTGAAAG GCAGTATTTG CCAACAGATT CGTTCTTACT GAATTACAAA TCTCAGAGAT 000400 000401 TTCCTGTTTA CCAGAAGTCC TCTTGGAGTG CATGGGATAT AGAAGCAGCC ATTTTGAGCA TTCGCTTTGC ACCATCAACT 000480 000481 GCCTAGCATC TGAAATTGAA GTCAGTCTTA CATAGGAACG AATGCAGGAA TTTGGGAACT GAGCTGTGCA AGTGCTGAAG 000560 000561 AAGGAGATTT GTTTGGAGGA AA |
Predicted Small Protein
Name | NONHSAT102689_smProtein_431:514 |
Length | 28 |
Molecular weight | 3028.3955 |
Aromaticity | 0.0740740740741 |
Instability index | 65.6777777778 |
Isoelectric point | 5.31549072266 |
Runs | 6 |
Runs residual | 0.0155662909286 |
Runs probability | 0.0455308249427 |
Amino acid sequence | MGYRSSHFEHSLCTINCLASEIEVSLT |
Secondary structure | LLLLLLLLLLLHHHHHLHHHHEEEELL |
PRMN | - |
PiMo | - |