NONHSAT102988
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT102988 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1375 nt |
Genomic location |
chr5-:99384692..99386066 |
Exon number |
1 |
Exons |
99384692..99386066 |
Genome context |
|
Sequence |
000001 ATGCTAAAAC TAATTATTCC AACAATCATA TTACTACCAC TAACATGATT CTCCAAAAAA CATATAATTT GAATCAACAC 000080
000081 AACCACCCAC AGCCTAATTA TCAGCATTAT CCCCCTACTA TTTTTCAACC AGATCAACAA CAACCTATAT AGCTATTCTC 000160 000161 TATCCTTCTC CTCCGACCCC CTAACGACCC CCCTTCTAAT ACGGACAACC TGACTCCTAC CCCTCATAAT CATAGCAAGC 000240 000241 CAACGCCACC TATTCAACGA ACCCCTATCA CGAAAAAAAC TCTACGTCTC TATACTAATC TTCCTCCAAA ACTCCTTAAT 000320 000321 TATAACATTC ACAGCCACAG AACTAATTAT ATTCTACATC TTCTTCGAAG CCACACTTAT CCCCACCCTA GCTATTATCA 000400 000401 CCCGATGAGG CAACCAAACG GAACGTCTAA ACGCAGGCAC ATATTTCCTA TTTTATACCC TAGTGGGCTC CCTCCCCCTA 000480 000481 CTCATCGCAT TAATCCACAC ACACAACACC CTGGGCTCAC TAAATATTTT ATTACTCACC CTTACTGCCC AAGAGCTATC 000560 000561 AAACTCCTGA GCTAGTAACT TAATATGACT AGCATACACA ATAGCTTTCA TAGTAAAAAT GCCCCTCTAC AGACTCCACC 000640 000641 TATGACTCCC TAAAGCCCAT GTTGAAGCCC CCATTGCTGG CTCAATAGTA CTCGCTGCAG TGCTCTTAAA ATTAGGTGGC 000720 000721 TATGGCATAA TGCGCCTCAC CCTCATTCTC AACCCCCTGA CAAAACACAT AGCTTATCCC TTCCTCATAC TATCTCTATG 000800 000801 AGGCATAATC ATAACAAGCT CCATCTGCCT ACGACAAACA GACTTAGAAT CACTCATTGC ATGCTCTTCA ATTAGCCACA 000880 000881 TAGCCCTCAT AGTAACAGCT ATTCTCATCC AAACCCCCTG AAGCTTCACC GGCGCAGTCA TTCTCATAAT TGCCCACGGA 000960 000961 CTTACATCCT CCTTATTTTT CTGCCTAGCA AACTCAAACT ACGAGCGAAC CCACAGCCGC ATCATAATTC TCTCTCAAGG 001040 001041 ACTTCAAACC CTACTCCCAC TAATAGCCTT TTGATGACTT CTGGCAAGCC TCGCCAACCT CGCTTTGCCC CCCACCATTA 001120 001121 ACCTACTAGG AGAACTCTTC GTACTAGTGA CCTCATTCTC CTGATCAAAC ATCACCCTCC TACTCACAGG ACTTAACATA 001200 001201 CTAATCACAG CCCTATACTC CCTCTATATA TTTACCACAA CACAATGAGG CTCGCTCACA CACCACATTA ACAACATAAA 001280 001281 ACCCTCACTT ACACGAGAAA ACACTCTCAT ATTCATACAC CTATCCCCCA TCCTCCTCCT ATCCCTTAAC CCTGATATCA 001360 001361 TTACCGGTTT TACCT |
Predicted Small Protein
Name | NONHSAT102988_smProtein_404:574 |
Length | 57 |
Molecular weight | 6483.5381 |
Aromaticity | 0.0892857142857 |
Instability index | 56.1535714286 |
Isoelectric point | 11.0479125977 |
Runs | 9 |
Runs residual | 0.00741608118657 |
Runs probability | 0.0278121258514 |
Amino acid sequence | MRQPNGTSKRRHIFPILYPSGLPPPTHRINPHTQHPGLTKYFITHPYCPRAIKLLS |
Secondary structure | LLLLLLLLLLLEEELEELLLLLLLLLLLLLLLLLLLLLEEEEEELLLLHHHHHHLL |
PRMN | - |
PiMo | - |