NONHSAT103201
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT103201 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
577 nt |
Genomic location |
chr5-:111066339..111092926 |
Exon number |
3 |
Exons |
111066339..111066743,111071127..111071204,111092833..111092926 |
Genome context |
|
Sequence |
000001 AATCTGTCTT TCTAGCATGT TGCCCTTTTT CAACCACATT TGTGTTTCAG GTGTAGAGAG GAGAGAGAGT GAACAGGGAG 000080
000081 CGGGGCTTTT GTCTGTTTAT TACCCAGAAC TCTTTGTCTG GGTCAGTCAA GAACCATTTC CAAACAAGGA CATGGAGGGA 000160 000161 AGGCTTCCTA AGGGAAGACT TCCTGTCCCA AAGGAAGTGA ACCGCAAGAA GAACGATGAG ACAAACGCTG CCTCCCTGAC 000240 000241 TCCACTGGGC AGCAGTGAAC TCCGCTCCCC AAGAATCAGT TACCTCCACT TTTTTTAATC GTAACACCTC CATTTGTATT 000320 000321 ACATATGGTG TATGGGTATT GATGAGGTCA TGGTATCATA TATGGGATTT TTTTCTGTGT AAATCATCAA GTATAAGAAG 000400 000401 AAACTATGGG ACTCTGAGCC TTGCTTTAGA GAATTTACAG TGGACAAATA GGTGTCATCA AACCAGTTTT TAATCATTCT 000480 000481 GACTCAAGTG AAAACGCTCA GAATTTCACA CTGTGAATCC ACGTTTACAA CCCTTACAGG TGGGCCTTCA GGCCTGGTTC 000560 000561 GCTACAACAA TGTCTTC |
Predicted Small Protein
Name | NONHSAT103201_smProtein_341:472 |
Length | 44 |
Molecular weight | 5297.9638 |
Aromaticity | 0.186046511628 |
Instability index | 58.9395348837 |
Isoelectric point | 9.38165283203 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.015481868423 |
Amino acid sequence | MRSWYHIWDFFLCKSSSIRRNYGTLSLALENLQWTNRCHQTSF |
Secondary structure | LLLEEEEEEEEEELLLLEEELLLHHHHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |