NONHSAT104298
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104298 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1025 nt |
Genomic location |
chr5-:141666534..141672542 |
Exon number |
4 |
Exons |
141666534..141666557,141666622..141666668,141666680..141667050,141671960..141672542 |
Genome context |
|
Sequence |
000001 GGCTTATGGT AGGTGCTTAA TAAAAATGTG TTGAATGAAC AAATGAACAA ATGAATGAAT TTACTGGGCG TTCATGCACC 000080
000081 ACGGCACTGT GTAAGGCACT TTACATATTA TATATACATT TGTTCATCCT CACAATTATT ATCACTACAA AGTGACTCCT 000160 000161 CCCTTTTTTT TTTGAGACAA GGTCTTGCTC TGTCACCCAC TCCTGCTCAC TGCAGCCTTG ACCTCCCAGG CTCAAGTGAT 000240 000241 CCCCCAGCCT CAGCTCCCTG AGTAGCTGGG ACTACAGGGT GTGCCACCAC ACCTGGCTGG CTAATTTTGT TTATTTATTT 000320 000321 ATTTATTTAT TTTGTAGAGC TGGGGTTTCG CCATGCTGTC CAGGCTGGTC TCGAACTTCT GAGCTCAAAC GATCCGCCCA 000400 000401 CCTTGACCTT CCAAAGTGCT GGGATTACAG GCATGAGCCA CTGTGCCTGG CCCATGTGAC TCCCATTTTA AAGACAAAGG 000480 000481 AAACCAGGTT AAACTCTGAG CTTTGCACAG CAGAGAGAAA CTTCCACATG CTGCTCCCTC TGCCTGGAAT CCCCTGCCTC 000560 000561 CTATTCATTC CTACTTGATG TACTTTCAGC AAACAAAGCC CCCAGGGCAC AGCTGGGGAG AGTGAGGCTG AGGAGTGTTT 000640 000641 GCAGGAAAGG ATAGGAGCCA CAGAGAAGGG CCTGGCCATG GGTCGGACAG TTCTGCTGTA CATTCACAGG CTCCACTGTG 000720 000721 TACCAGGCCC GGCTGGTCAC TGAGCACATA TAGATTAACT TATGCCTAAA GATTGTTCTC TTCCTTCAAA AACTAGCAGG 000800 000801 TGGGCCGGGC GCGGTGGCTC ACGCCTGTAA TCCCAGAACT TTGGGAGGCT GAGGCGGGCA GATCACAAGG TCAGGAGTTT 000880 000881 GAGACCAGCC TGACCAACAT GGGGGAAACC CTGTCTCTAC TAAAAATACA AAAGTTAGCC AGGCGTGGCG GCCCCCCAGC 000960 000961 TACTTGGGAG GCTGAGGCAG GATAATCACT TGAACCCGGG ACCGTCTCAA AAAAAAAAAA AAAAA |
Predicted Small Protein
Name | NONHSAT104298_smProtein_50:154 |
Length | 35 |
Molecular weight | 3906.7187 |
Aromaticity | 0.117647058824 |
Instability index | 54.2676470588 |
Isoelectric point | 8.80328369141 |
Runs | 4 |
Runs residual | 0.0685033507074 |
Runs probability | 0.0207339692634 |
Amino acid sequence | MNEFTGRSCTTALCKALYILYIHLFILTIIITTK |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHHHHHEEEELL |
PRMN | LLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | ooooooooooooooTTTTTTTTTTTTTTTTTTii |