NONHSAT104484
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104484 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
778 nt |
Genomic location |
chr5+:148631907..148638137 |
Exon number |
2 |
Exons |
148631907..148632400,148637854..148638137 |
Genome context |
|
Sequence |
000001 CAACATTTCC TGTCCCTTCT TGGCCCACTT TTCCTGAATC CTGCCCTAGG TCTCTTGCCT ACTGAAATCA GATACTCTCC 000080
000081 CTGGGCTTCA GAGACACTCT GTTGGCTTGC CAGTCACCAA ATATTAGACA CTTACATTCG GGAGGTCATG TGCCCATATT 000160 000161 ATTCCATGGG CACATGGCAA ATACCTCCAA GCTTATTCCT AGTAGTATTA GGGGACTCTC TTGGGCCTTG TCTTTTGAGA 000240 000241 GAAGGTATCT TAAGACTGCT GGGCAACCCC AAGAAGGGCA GATCCAGCTC TTCCTCCAGA CTTAATTTCT GGCCATTTCT 000320 000321 GGATAGAACA GAGAGCCCAG ACACAAAATG TACCTGAAAG GAACAAGCCC ACCACCCTCA CCCAAGCTGG AGACCACCCC 000400 000401 CCTTTCTCCT TAGATCTACC CTTATGAACT GCTGCTGGTG ACTACAAGAG GAAGAAACCG ACTGCCCAAG GATGTAGACA 000480 000481 GGACCCGTTT AGAGCGCCAC CTGTCCCAGG AAGAGTTCTA CCAAGTCTTT GGCATGACCA TCTCTGAGTT TGACCGGCTG 000560 000561 GCCCTCTGGA AGAGGAATGA ACTGAAGAAG CAAGCCCGGC TGTTCTAGGC AGAGGCTCTA TAAATATATA TGCATTTATA 000640 000641 TAAAGATATA TGTAAAATCT CTCTACTGAA GCTCGGTATA ATCCTCTCTT GTGTAATGGG ACACACTGCC TGCCATGAGA 000720 000721 CTTGCTTTTC TGTACTGTCA GGCAAGCCCA CGTCATCGAG ATATTTTTAT GCTCCTTA |
Predicted Small Protein
Name | NONHSAT104484_smProtein_173:304 |
Length | 44 |
Molecular weight | 4866.5549 |
Aromaticity | 0.093023255814 |
Instability index | 42.1186046512 |
Isoelectric point | 10.266418457 |
Runs | 6 |
Runs residual | 0.0177684870656 |
Runs probability | 0.0331507978567 |
Amino acid sequence | MANTSKLIPSSIRGLSWALSFERRYLKTAGQPQEGQIQLFLQT |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHHHHHLLLLLHHHEEELLLL |
PRMN | - |
PiMo | - |