NONHSAT104877
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT104877 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
565 nt |
Genomic location |
chr5+:161058736..161112977 |
Exon number |
4 |
Exons |
161058736..161058839,161063790..161063902,161067300..161067374,161112705..161112977 |
Genome context |
|
Sequence |
000001 actcaggctg gatggagtgc agtggcacga tcatcactgc aaccttgacc ttctgggctc tgatgaccct cccacctcag 000080
000081 ccacttgagc agctgggacc acagCCCACT GAGACCAAAG TCCATGTGGT CAGACACAAA AGAGCCATCG ATTGCTGAAC 000160 000161 CTGTTCACTC CTACCTTCAA AGGCACAAAA AGAACACAGG AAGTCAATAT AAAGCAGgct cataggtgga agggacttgc 000240 000241 cttgtctcag atgagacttc ggattggact tttgggttaa tgctgtaatg agACTCTCCT TTCCCAACTG AGTCAGTCAG 000320 000321 AGGAGCCTGG GTGTCTGCAG GACATAATCT AAGACCACAA ACCACCTTGT TCCACGTGAG AAGGAAACAA GAAAGAAGGG 000400 000401 AGCCAGGGGA ATCCTGCAAA TTTTTAGGCA ACCTCTTTAT CTATTGGATT ACTGACTTGA GGCAAACAAG GAACAGAGAT 000480 000481 ATGAAGGGTT TGAAAGATTT CTCCAGTTGA TTGGCAGAGA AGAGCTGGCT AGCAGGGAGG ACGACCCTAG GAGGGTGAAT 000560 000561 TCTGC |
Predicted Small Protein
Name | NONHSAT104877_smProtein_11:157 |
Length | 49 |
Molecular weight | 5360.2591 |
Aromaticity | 0.0416666666667 |
Instability index | 62.0854166667 |
Isoelectric point | 6.69586181641 |
Runs | 6 |
Runs residual | 0.0405701754386 |
Runs probability | 0.0397603485839 |
Amino acid sequence | MECSGTIITATLTFWALMTLPPQPLEQLGPQPTETKVHVVRHKRAIDC |
Secondary structure | LLLLLEEEHHHHHHHHHHLLLLLLLLLLLLLLLLLEEEEEEEEEEEEL |
PRMN | - |
PiMo | - |