NONHSAT105547
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT105547 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
718 nt |
Genomic location |
chr5-:178178352..178181218 |
Exon number |
2 |
Exons |
178178352..178178894,178181044..178181218 |
Genome context |
|
Sequence |
000001 ctctgctgag aagtcaatct tgggcaaatt acttaacctc tttgcgtatg ttttctcatc tgtcaaacag ggtgtgtaat 000080
000081 agtGGCATCA TGAGCTAGCT GTTTGGACGA AGGTTATAGT TGGAAGATTT CAGAGAAAAA CGAATGGCCA ATACTTGGAA 000160 000161 CCTAGAGGGC CTTTGGGTTT GGCTTCCAGA ACCAATCAAG AGGCAAAAAC TACAATTCCA CTGTCAAGAT TATAGTTTGT 000240 000241 TTTAAACCCT AACGTTGTCT TTTAAAAAAT TGCATCCCAG AAGAGCATTT GTGGATTTTT AAATATCCCA TTTATCCTCT 000320 000321 CTAAACTTGG AATCTGATGT CAGCATTGCC TTGAAATCGT CTGTGGCAGA TTTATAATTT TTCTGGAGGG GAAAGAGGGA 000400 000401 AAAACAAGAT GAAAAAATGG GGACTTTTTT TCTTTTGGCT TAAAACCAAA GATTCAAAGC TGGTATGAAT GAATGGCTTG 000480 000481 GAATGAAGCC TCTGGTGAGC ATAGTGGTGT TTGCAGTCCT TCTACAACCT TTGCATGGTT TGCAGGGTCT CCCCACTTTG 000560 000561 TGTCATGACT GCTGGCTGAG GTTATTCTGG GGAGATGATA GCTGTGGAAA ATGTGATGTA GAACTCTGCT CCCAGCCTGC 000640 000641 ATGCTCCCTT TCCAGGACTG TGTTGGATCG ATGCAGCTCT ACTTGGAACG GTGGAATAGG GGCAGAAATA CAGAAATT |
Predicted Small Protein
Name | NONHSAT105547_smProtein_143:244 |
Length | 34 |
Molecular weight | 4092.6999 |
Aromaticity | 0.181818181818 |
Instability index | 57.0454545455 |
Isoelectric point | 6.51116943359 |
Runs | 6 |
Runs residual | 0.00230566534914 |
Runs probability | 0.0471059294588 |
Amino acid sequence | MANTWNLEGLWVWLPEPIKRQKLQFHCQDYSLF |
Secondary structure | LLLLLLLHHHHEELLLHHHHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |