NONHSAT106425
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT106425 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
692 nt |
Genomic location |
chr6+:1267560..1270487 |
Exon number |
4 |
Exons |
1267560..1267789,1269309..1269582,1270158..1270297,1270440..1270487 |
Genome context |
|
Sequence |
000001 AAATGTTTTT TAAAGCACCT CTGCCCATAA ATGCAACACA AACAAGTTGC CCTGTGAGTC ACAGGACGAG AGCACATGCT 000080
000081 AAGTCCGCGT AATGATCTTT ATGTAATTTG CCCCTTAGTC ATTGTCTGGC CCATTAGGTA AACAGGCAGT GTGCATTTCT 000160 000161 TTGAAAATAA GGGTCTCTAT AAAAACTGCC ATTGTGAATA GACTGAGCAA TAAAGCGCCC CACAAGGTGT GCTCCCTGCC 000240 000241 TCCATTTCCT CTATAAAGTG GGACAATGAT AGTAACAACC TCAATTTGTT TGTATGAGAA TGAAATGGGA CACTGCACAG 000320 000321 GCACCCTTAG CATGCGCTGT GGACAGAGCT CTCTTCCTTA CTAGCTGGTA GTATGCGCCA AGAGGGGATG AGCCCAGCCT 000400 000401 ATCTGTGGGA GAGTCATCAG GGCTTTTTGA GCATTGGTGC CCACCAAGAA GTGTGATGGG CCTGGATTAT GAAGGGCTTC 000480 000481 AAAAATTGGC AGATGAACTT CAACTTCCTG CTAAACACCA TCGTGTATGC AGTTATTTTC CTCCCCTCAG CTCCCCACAG 000560 000561 TATTCCTCTG CTGTTCCAAA TGTCCATGAT TCTTTCAAAT CATGGAAACT AAGATCCTGT CTGTCACTAG CTCTCAAAAA 000640 000641 GTTTTGAAAA ATGTCACATG CTACAAATCA GGGCCTGGTT TGTTGTTTTG TC |
Predicted Small Protein
Name | NONHSAT106425_smProtein_455:646 |
Length | 64 |
Molecular weight | 7164.2064 |
Aromaticity | 0.111111111111 |
Instability index | 62.773015873 |
Isoelectric point | 9.06414794922 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.01937231349 |
Amino acid sequence | MGLDYEGLQKLADELQLPAKHHRVCSYFPPLSSPQYSSAVPNVHDSFKSWKLRSCLSLAL KKF |
Secondary structure | LLLLHHHHHHHHHHHLLLHHHLLEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHH HLL |
PRMN | - |
PiMo | - |