NONHSAT106967
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT106967 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
956 nt |
Genomic location |
chr6+:3081112..3082067 |
Exon number |
1 |
Exons |
3081112..3082067 |
Genome context |
|
Sequence |
000001 CCTTCTCCTC AGGCTCAGAT CCCACCACCC TTTCATGAAA CAGTTGCTTT GGCCTATTTG ATAACCTTTC CATTTCATAG 000080
000081 ACTTAATATC ACTTGTTTTA GATGAGTACT CCGCTTTCTG TAAAAGGAAG GATAATTTTG GAAATCATTG AAGGAATGTG 000160 000161 CTACTTACAT GGAAAAGGCG TGATACACAA GGACCTGAAG CCTGAAAATA TCCTTGTTGA TAATGACTTC CACATTAAGG 000240 000241 TAAACCATCA TCGGTAGGCT TCCAGAAAGT TGGGTGATTT TAGTTTTAAT TCTCCAATGT AAATCCATTC TCGTACATTG 000320 000321 GAGAAGCTAA AGGAAGACCT AGCTCAGCTT ATAACTGTTG ATGATGGTGC CGAAAGGCTC TACCGGTGAT TGAGAGGAAG 000400 000401 GCTGCAGGCT TGATGGGATC AGGAGATAAC TGTCAGGATA ACTCATATCT TTTGGGGGAG GAGTGGAGTT GAATGGGGTA 000480 000481 GATGAGAAGA CCTCTTTCCT AGACTGTGTT TTTTCCTCTG TTAGAAACAT TTAGAAACAT TCAAGGGTTG CCCTTTTCAT 000560 000561 CCTGGAATGG GCCATTGGTG TCATAATGTT CTCCAGGAAA TCTGTGTCAC CAAGACTCTC CTCCTCTGGA AATGCAGGGG 000640 000641 AATGTGAAGG TGTGTGCGGA AAATCCTTAG AGTTCAGATA TGGCCTAAGA GTGAGATCAG CGGCCGGGTG CAGTGGCCCA 000720 000721 CGCCTGTTAT CTCAGCACTT TGGGAGGCTG AGGTGGGCGG ATCACCTGAG GTCGGGAGTT CGAGACCAGC CTGACCAACA 000800 000801 TGGAGAAACC CCATCTCTAC TGAAAATACA AAATCAGCCG GGCGTGGTGG TGCATGCCTG TAATTCCAGC TACTCGGGAG 000880 000881 GCTGGGGCAG GAGAATCGCC TGAACCGGGG AGGTGGAGGT TGTGGTGAGC CGAGATTGTG CCATCGCACT CCAGCC |
Predicted Small Protein
Name | NONHSAT106967_smProtein_101:256 |
Length | 52 |
Molecular weight | 5859.8479 |
Aromaticity | 0.0392156862745 |
Instability index | 47.5764705882 |
Isoelectric point | 7.98236083984 |
Runs | 10 |
Runs residual | 0.0418365365948 |
Runs probability | 0.0328828828829 |
Amino acid sequence | MSTPLSVKGRIILEIIEGMCYLHGKGVIHKDLKPENILVDNDFHIKVNHHR |
Secondary structure | LLLLLLLLEEEHHHHHHHHHHHLLLLEEEELLLLLLEEELLLLEEEELLLL |
PRMN | - |
PiMo | - |