NONHSAT107100
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107100 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
2405 nt |
Genomic location |
chr6+:3385992..3389262 |
Exon number |
10 |
Exons |
3385992..3386615,3386626..3386750,3386762..3386866,3386974..3387075,3387164..3387265,3387367..3387453,3387623..3387823,3388024..3388202,3388286..3388389,3388487..3389262 |
Genome context |
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Sequence |
000001 CTGCCCACAA ACACATGTGC CTGCAACTGG CCCATATGAA AAACAAAAAC TCCCTGTCCT CAAAACAAAC AACATTCCTC 000080
000081 AGAGAGCACT CTGTTACCAG GACAGAGAGA CGTATTAGAG CTAGAATACT GCAAAGGGAA ATGTGGTCAT CTCATTTTTT 000160 000161 TTCACAGTTC TTTTCCAAAA AGAACATCCA CAGAATAGCC TATTAGGCTG CCAAGATACT GCAACAAACA CCCAAGCCCC 000240 000241 GCATTTGAGC AGGACGCTGC CAGATGTGAC ACATCTCACT CTAAATGATG CGGCTCTCAA ATTCCCCATT CATGCCCATT 000320 000321 CCTGTGGTCA CTGATGAGGG GACTTCAATC GGCTTGAAGA ACTCACACCT TTCCACACCC CTCCCGGGTG TCTCATTACC 000400 000401 TGACGAGGTG GATTTATTAA TGATCTGGGT TGACATTAGC TGGGAGCATC ACAGGGAAGC CAGTGTGCCC TGACAGTGCA 000480 000481 CGGTTAGGGG TTTAGAAACC CAAGGCAGGG GAGGTAGGAA GGGGAGGCAG AAAAGGCTGC TCAGGGTGGC GGTGGCCCAA 000560 000561 GCTGGAGGGC AGACAAGCCT CAGGCTGGAG AGCGAAGGAG AAGGGAGAGC ACGCTTGCTC TGTGGCACAA CCAGCCCTGG 000640 000641 GGTCCCTGGA TGTGGCACCA GGAGTTGGTG CTTCTCTTTC CTCCTCAAGA AGTTGGCTTC TCTGGAAAGT GGGGGAGGGT 000720 000721 CTGAATAAAG CAGCCAACAG GAGGCTCCGA GCCTTGTTCT TCCAGACACA GAGGAGGCTG GCACTGCCAG GCTTGGAGGC 000800 000801 TGCTTGCTCC TCAGTAGCCG TGCCAAGCGT GGCTGGGGAC AGCCCGAGAG CTCACAGTGG GACTGGGTCT CCCACCCAGG 000880 000881 GCACCACTGG AAGGACATCT GGAAAGTCTG CATACTCTGA TGCTGACACA CGGACCTGGC AGCAACATGG GGAACACCAC 000960 000961 TCCAGCCTTT GAAATCAACA ACAACCACAC ACAACTCTTC TCTTCCAACC TCACCCAGAT TTTCACCTTT GTTTCTCAGA 001040 001041 AAAACCCTAC TAACCTTTCC CTTTGCTGAA GAAATAAAGT GACTCACTCC TAACAAACTA AGTGGAGAAA GGGAAAACTA 001120 001121 GTAACTGCAG AGGAGAAGCC TGGCACCGTT ACACCACTGT CCTCATCACA GTGTTAAGGT CACAAAAGAC AAACCCAAGG 001200 001201 AACTGTCACA GATCAGAGGC GACTGTGGAG ACACAGCTAC ATTTAATAGA GTGTTCTGGA ACAGAAAAAG GACAGTAGAG 001280 001281 AAAACACTGG TGAGATTCAA GGAAAGTCCG TCGTTTAGTT AGTCCCACGA CAACGTCCGT TTCTCAAAAG AGTTAACGAA 001360 001361 ACCCAAGAGT CGTGGGCTTC TCTGATAAAG TTCTCTGAGG GTGAGTGGCA GGAAAGGAGA AGGCAGGCCG CAGCGAGGAT 001440 001441 GTCCTGGCAG CCCACGACAG TCTGTGCCAC GGCATCTCCT TTCGGTGGAA TTCGTGCTGT TCCTGCTGCC TGAAAGAGAA 001520 001521 GCCCACTCAA ATCACTGGTG CAGCCCTTGA CTTTGTAAAA TCAAAATGGC TCACTGGCCT AGATGTAGGG AGAGGGCAAG 001600 001601 CCCGCCACAG AAACACAGAA GGGGGTTCAT CACATACTTC CTCATGGGGG AGGGCAGAAA TGCAATAAAA TGCAATAAAA 001680 001681 TGCAATAAAC AGAAACAAAA TGCAATAAAC AAAAACATCA GAGTGGAAAG TGTATGCAGA TCACAATGCT ACCATCAAAC 001760 001761 AAAAACAAAA AAGAAAATGA CAAGTTTTGG GCGAGGATGT GGAGAAACTG AAACCCTTGT GGCCTGCTGG TGGGAATGTC 001840 001841 AGATGGAACA GCCAGCCACC GTGGAAAACT GTGACACTTC CTCGAAAACA TAAAAATACA ATTACCATAT GACCCAGCCA 001920 001921 TCCCACTTCT GGGTATATGC CTAAAACAAA TGAAAGAAGG TACTCAGAAA TTGTACAACC AAGTTCATAG CAGCGTTATT 002000 002001 CACAACAGCT AAAACATGGA AGCAACTCAA GTCTCCATCA ACTGATGAAT GGATAAGCAA AATGCGGTCC ATCCATACAG 002080 002081 ATACATGGAT ACAATGGAAC ATGATACAGC CTTGAGAAGG AAGAAAATCT TGTCCCGAGC TGCAGTGTGA TGAACCTTGA 002160 002161 AGACATGATG CTAACTGAAG TAGATCAGTC ACAATAGGAC AAATACCATC TGATGCTACT TATAAGGTAC CTAGCGTTGT 002240 002241 CAAATTCAAA GAGACAGACA GCAGAATGGG GGTTCCCAGG GGCTGTGGGG AGGGGGAATG GGGAGTTCGT ATTTTTTGCA 002320 002321 GACCAGAGTT TCAGTTCTGC AAATGAAAAA GTTCTGTGGT GGCTGCGGGC GTGGTGGCTC ACTCCTGTAA TCCCAGCACT 002400 002401 TTGGG |
Predicted Small Protein
Name | NONHSAT107100_smProtein_14:205 |
Length | 64 |
Molecular weight | 7712.8863 |
Aromaticity | 0.111111111111 |
Instability index | 62.3507936508 |
Isoelectric point | 11.5681762695 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0288425680583 |
Amino acid sequence | MCLQLAHMKNKNSLSSKQTTFLREHSVTRTERRIRARILQREMWSSHFFSQFFSKKNIHR IAY |
Secondary structure | LLHHHHHHLLLLLLLLLLLEELLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLEEE LLL |
PRMN | - |
PiMo | - |