NONHSAT107143
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107143 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1064 nt |
Genomic location |
chr6+:3489056..3491391 |
Exon number |
6 |
Exons |
3489056..3489252,3490142..3490160,3490252..3490364,3490478..3490532,3490610..3490727,3490830..3491391 |
Genome context |
|
Sequence |
000001 CAAGTAGCTG GGACTGCAGG TGCACACCAC CACGCCCAGC TAATTTTTGT ATTTTTGGTA GAGATGGGGT TTCACCATGT 000080
000081 TGGCCAGGCT GGTCTCGAAC TCCTGACCTC AGGTGATCCA CCCGCCTCAG CCTCCTAAAG TGCTGGGATT ACAGGCATGA 000160 000161 GCCACCATGC CTGGCTTGTT TTTATTTTAT TTTTTCAATC CTCTGGACAC TTGTTTTTCA GGGTCTGCCG TGGGTGTCTG 000240 000241 CTGGTGGCTC GCTGTTATAG GTCCAATTGT GTCCCTCAGA ATGTACATAC TGAAGTCCTA ACCCCCAGTA CTTCAGAGTC 000320 000321 TGACCTTATT TTATGCTTTT AATTGACAAA TAATAATTGA ACATATTCAC GGGGTCGGGG GTACCCGTTA GGAACCAGGC 000400 000401 TGTAAGGGGT GAGCAGCCTG TGGGTGAGCA AGTGAGGCTT CATCTGTATT GACAGCCACG CCCCATCTTT TGCATTACTG 000480 000481 CCTGAGCTCT GCCTCCTGCC AGCCCATCAA TCTAGTTGCA GGAAAACAAG CTCAGGGCTC CCACTGTTTC TACATTATGG 000560 000561 TGAGTTGTAT AATTATTTCA TTATATGTCA TCACAATGTA ATAATAGTAG AAATAAAGTG CACAATAAAT GGAATGTACT 000640 000641 TGAATCATCC TGAAGCCATC CACCACCACC CCATCCATGG AAAAAATGTC TTCCATGAAA CCAGTCCCTG CTGCCAAAAA 000720 000721 GATTGGGGAA CTGTGGTGTA TAGTCATCAG ATCAGGGTAA TCAGCATATC TGTCAGCTCA AACATGTATT ATTTCTTTGT 000800 000801 GTTGGGAATG TTCGCTATTC TCCTTCTAGC TGTTTGAAAG TACAGAGCAT TGTTAGCGAT AGTCACCCTA TAGTACTATG 000880 000881 GGACAAAAGA ACTTATTCCT CCTATCTAGC TGTGATTTTG AATCCTTTAA TAAATCTCTC CCTAATCCTC TTTTCCCCAT 000960 000961 TCTTCTCAGC CCTGAGTATC CTTTGTTCTA CTTTTTACAT CTATGCGATC AACCTTTTTA AAGCTTCCAT ACATGAGTAT 001040 001041 GAACACGCCA TGTAAAAAGG GGAA |
Predicted Small Protein
Name | NONHSAT107143_smProtein_584:652 |
Length | 23 |
Molecular weight | 2562.796 |
Aromaticity | 0.0454545454545 |
Instability index | 109.513636364 |
Isoelectric point | 9.30401611328 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0352587882001 |
Amino acid sequence | MSSQCNNSRNKVHNKWNVLESS |
Secondary structure | LLLLLLLLLLHHHLLEEEEELL |
PRMN | - |
PiMo | - |