NONHSAT107785
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT107785 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1055 nt |
Genomic location |
chr6-:12583000..12585636 |
Exon number |
2 |
Exons |
12583000..12583739,12585336..12585636 |
Genome context |
|
Sequence |
000001 TGGTGATCGA TTCCCAGTGC CATCCTGAAC CACAAGATTG GAATATCGCA CCTTTCAACT GCCTGGGCTG ATAAACAATA 000080
000081 CAGCATGTAC TCAGCTTCAT AAACACTCTG CCTTGTTACA AAGGGCATTG CAAACTCGCC GTGATAGGAC TTGACCTTAA 000160 000161 AAGCTATAGA CAATCTAGCG GAGCACAGAC GGTTTCATAA AGTACAATCA CTTCCTGGAA TTCTTGGGCC AGTGCAGTCG 000240 000241 GAGCCGTGCA AATCCTGTTT TCCTTGCATT GTTTCCTGCA TGTGAATATC ATCAGTCTAG CAGTCTCTCT CTGTCACCAG 000320 000321 GCTGGAGTAC AGTGGGGCAA TCTCGGCTCA CTGCAACCTC TGCCTCCCGG GTTCAAGCGA TTCTCCTGCC TCAGCCTCCC 000400 000401 GAGTAGCTGG GACTGTAGGT GCACGCCACC ATGAGCAGTT ATTTTTTGTC TTTTTAGTAG AGACGAGGTT TCACTATGTT 000480 000481 GGCCAGGCTG GTCTCGATCC CTTGACCTCA TGATCTGCTG GCCTCAGCCT TCCAAAGTGC TGGGACTATA GCCGTGAGCC 000560 000561 ACCATGCCAG GCCCATCTAA CTTTTAATAT AGATTGTATG ATGTTTTCAT AAAACAAGCA GGGCTCAGAA AGGCCGTATA 000640 000641 AAGCCACAGA GCCAGCAAGC AGCAGAGTCT GCATTTTAAT CCATATGTTC ATGGCTTCAA AGCAATGTTA TTTAACTCTA 000720 000721 ACAATGCAAT TGAACTAACA ACTGACATCA GACACAAATA TTCTGAAGAA CCTGGAGAAA TAGAAAAGAA TTGGATAGAA 000800 000801 CTGATGGCTC ATGGGCAGAA GCTGTGCATC AGGAAGAGGA AATAAATGGC ATTGTTCAGC CATGAAGCCA TATAATTTCA 000880 000881 ACCTGACTTT CCTTCTCTAT TGTCCTGTCT CATTGTCTAG CTTGAAATGT GGCCGCAGTC ATGTCAAGTG GCTAACTTCC 000960 000961 TGCATATTTG GTTTCCTCAT GGGAGCTTAG TAATTCCTGA TTGATTTAGA GCAAGAAAGT AAAATAAATT CTAGTTTTTC 001040 001041 CAAAAAAAAA AAAAA |
Predicted Small Protein
Name | NONHSAT107785_smProtein_704:844 |
Length | 47 |
Molecular weight | 5486.2697 |
Aromaticity | 0.0652173913043 |
Instability index | 67.352173913 |
Isoelectric point | 7.93023681641 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0477536359889 |
Amino acid sequence | MLFNSNNAIELTTDIRHKYSEEPGEIEKNWIELMAHGQKLCIRKRK |
Secondary structure | LLLLLLLHHHHLLLLHHHLLLLLLHHHHHHHHHHHHLLLEEEEELL |
PRMN | - |
PiMo | - |