NONHSAT107900
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT107900 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
793 nt |
Genomic location |
chr6+:16290176..16295352 |
Exon number |
2 |
Exons |
16290176..16290852,16295237..16295352 |
Genome context |
|
Sequence |
000001 ctgcaacctc cacctccggg gttcaagcga tttccggcta atttttgtat ttttagtaga aatggggttt tatcatgttg 000080
000081 gccaggctgg tcttgaactc ctgatctcaa gtgattcacc tgcctcagcc tcccaaagtg ctaggattac agggctgagc 000160 000161 cactgtgcct ggcAGAATAC TCCCCAATCT TAATGTTTCT GTGATTCTAA GAGAGTTAGA TCTGAGGAAG GTGGTCGTAG 000240 000241 TTAGCCATTA AAAGCCATTC AGCATGGTCC AGTATATGGG ACACTAGCCT TCAGTAGGCT GCATTTGTTT CTCGCAGTGT 000320 000321 CCCATGGCCC TTTCTCCCTG CATGGAAGCC TTCTCCCTTT TTCCAGGAGG AGACAGGCGA GAGAGGTCCA GCCTTTCTCT 000400 000401 TGACTATAGC TGGGCGGGGA GGGAGGTGAA CTGGGCAAGC ACTGGGATTT TTTGAGAGCC TTTTCCCCTG AGCTGTTTTC 000480 000481 TCTGCTACTC GCTTTCATCC CCACCGTTGG CATTTAGGAG CTGGAGCAGA TTTTGTCATG CTGGGAGGAA TGTTTTCGGG 000560 000561 TCATACGGAG TGTGCTGGAG AAGTGTTTGA GAGGAACGGA CGGAAGCTCA AGCTCTTCTA CGGGATGAGC TCTGACACCG 000640 000641 CCATGAACAA GCACGCAGGA GGAGTTGCTG AGTACAGAGC CTCTGAGGGT AAGACTGTGG AAGTTCCTTA CAAAGGAGAT 000720 000721 GTGGAAAACA CTATCCTGGA TATTCTCGGG GGACTGAGGT CCACGTGCAC CTACGTGGGG GCCGCCAAAC TCA |
Predicted Small Protein
Name | NONHSAT107900_smProtein_323:454 |
Length | 44 |
Molecular weight | 4799.338 |
Aromaticity | 0.139534883721 |
Instability index | 48.9465116279 |
Isoelectric point | 4.93572998047 |
Runs | 6 |
Runs residual | 0.0177684870656 |
Runs probability | 0.0149266913973 |
Amino acid sequence | MALSPCMEAFSLFPGGDRRERSSLSLDYSWAGREVNWASTGIF |
Secondary structure | LLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLLLEEEHHHLLLL |
PRMN | - |
PiMo | - |