NONHSAT108409
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT108409 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
588 nt |
Genomic location |
chr6+:27793690..27794715 |
Exon number |
3 |
Exons |
27793690..27793763,27794112..27794504,27794595..27794715 |
Genome context |
|
Sequence |
000001 GAAGGTCAGC AGATAAACAA GTGAACAAAG GTCTCTGGTT TTCCTAGGCA GAGGACCCTG CGGCCTTCCG CAGCTGTTTG 000080
000081 TGTCCCTGGG TACTTGAGAT TAGGGAGTGG TGATGACGCT TAAGGAGCAT GCTGCCTTCA AGCATCTGTT TAACAAAGCA 000160 000161 CATCTTGCAC CGCCCTTAAT CCATTTAACC CTGAGTTTGA CACAGCACAT GTTTCAGAGA GCACAGGGTT GGGGGTAAGG 000240 000241 TCACAGATCA ACAGGATCCC AAGGCAGAAG AACTTCTCTT AGTACAGAAC AAAATGAAAA GTCTCCCATG TCTACCTCCT 000320 000321 TCTACACAGA CACGGCAACC ATCCGATTTC TCAATCTTTT CCCCACCTTT CTCCCCTCTC TATTCCACAA AGCCGCCATT 000400 000401 GTCATCCTGG CCCGTTCTCA ATGAGCTGCT GGGCACACCT CCCAGACGGG GCCGTGGCCG GGCAGAGGGG CTCCTCACTT 000480 000481 CCCAGTAGGG GCGGCCGGGC AGAGGCGCCC CTCACCTCCC GGACGGGGCG GCTGGCCGGG CGGGGGGCTG ACCCCCCCAC 000560 000561 CTCCCTCCCG GACGGGGCGG CTGGCCGG |
Predicted Small Protein
Name | NONHSAT108409_smProtein_293:487 |
Length | 65 |
Molecular weight | 7024.0024 |
Aromaticity | 0.078125 |
Instability index | 67.7953125 |
Isoelectric point | 10.2743530273 |
Runs | 7 |
Runs residual | 0.03921875 |
Runs probability | 0.0442122795065 |
Amino acid sequence | MKSLPCLPPSTQTRQPSDFSIFSPPFSPLYSTKPPLSSWPVLNELLGTPPRRGRGRAEGL LTSQ |
Secondary structure | LLLLLLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLEEEE ELLL |
PRMN | - |
PiMo | - |