NONHSAT112782
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT112782 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
579 nt |
Genomic location |
chr6-:41904744..42016428 |
Exon number |
2 |
Exons |
41904744..41905132,42016239..42016428 |
Genome context |
|
Sequence |
000001 GTAAACACTT CGCCACTGCA GGGGTGGAGA CTGGCTCTGT TCGGATGCCG GCCGGGGGGG AGAGGTGCAA TCCTCTCCTC 000080
000081 GCGGCTGGTG GTTGCGACCA CCCCCACTCC CCAAAGGCAG GCTCCGGAGG CGGCGGGACA GAGCGCCTGC GACCCCAGTC 000160 000161 GGTGCTCCGG GGAGGTCACC TGACGAGGAG GACTGGGAGG TGCTGGTCCT AGGGAAGCTC AAGTGGGACC TGGCTGCTGT 000240 000241 GATTGCACAT GATTTCCTGG CCTTCATTCT GCACCGGCTC TCTCTGCCCC GTGACCGACA GGCCTTGGTC AAAAAGCATG 000320 000321 CCCAGACCTT TTTGGCCCTC TGTGCTACAG GTAAGAGCCC TATGCACATT TTTGCCAAAT TGGAAAAATC AGAAGACTTA 000400 000401 TAAGGGTGAG AGGTAACTGA AGATTCTGGT TTATACTGTC AAAATTCCTT TGTGAAAATT ATACCCCCTC TGAGCCCCCA 000480 000481 GTCTCAATGC AGAAAAGCAG GTTATAATCA GCTATATGGG ATCTCAGacc cctccagttt gtagtgggga cactgagggt 000560 000561 atagagagaa gtgacttgc |
Predicted Small Protein
Name | NONHSAT112782_smProtein_44:211 |
Length | 56 |
Molecular weight | 5664.3303 |
Aromaticity | 0.0181818181818 |
Instability index | 79.4309090909 |
Isoelectric point | 10.6057739258 |
Runs | 11 |
Runs residual | 0.0484848484848 |
Runs probability | 0.0204107851166 |
Amino acid sequence | MPAGGERCNPLLAAGGCDHPHSPKAGSGGGGTERLRPQSVLRGGHLTRRTGRCWS |
Secondary structure | LLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLEEELLLEEEELLEEELLLLEELL |
PRMN | - |
PiMo | - |