NONHSAT113344
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113344 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1072 nt |
Genomic location |
chr6+:64155652..64165934 |
Exon number |
2 |
Exons |
64155652..64156647,64165859..64165934 |
Genome context |
|
Sequence |
000001 GGAAGCTTTA TAAActctca tctgaattac tacaattgcc tgccaactgt gttcttcttt ccaccctagg ttccttatca 000080
000081 tctattctcc attcataaca cagccatagt gatccttctg aagtatctca gacatctcaa cccccaccgc cccatgacct 000160 000161 ctccatcatc acactccaag taaaagcatc ttgacaatgg cctacaaagt gtacatgatc agccgggtgt cgtggctcac 000240 000241 gcctgtaatc ccagcacttt ggaaggctga ggcaggcagg tcactcgagg tcaggagttc gagaccagcc cagccaatac 000320 000321 ggtgaaaccc catctctact aaaaatacaa aaattagccg ggccatggtg gcacattcct gtagtcccaa ctactcagga 000400 000401 ggctgaggca ggagaatcat ttgaacctgg gaggcagatt ttgcaatgag cagagatcgg ccactgcact ccagcctggg 000480 000481 cgacgagact gtgtctcaaa aaaaaaaaaa aaaaaaaacg aacagtgtac atgatggcat gccctctcac ctcactgact 000560 000561 ggattgcctc cccatcactc tgcccaggaa atgggccttc tcacagtttc tcaaacatac caagcacatt cccaccccca 000640 000641 gagcttaatc tatctccctc taccctgtca taatatttaa gaacttcaca cccgatatca tttattaatt tattatgctt 000720 000721 attttctgcc tccttctgct agaatataag tttcacgagg tcaaggattt tgtttactaa ggtaacctct tcagtagaac 000800 000801 agcaacgagc acatagtatg cacccaatac aatgtttgtt gagtgaataa atTTGCCATC AATTATGTAA GGCATTATCA 000880 000881 TTCTATTTCC TAACCTATGA GTTTTGAAAG ATTTCTAACA TGACCTTGAG CTTTTCAGTT CATGCTGGCT GTTAAGTTGA 000960 000961 TGTGAGTTGG TGGTCTTACT TGACCCAAGA AAAATAgtgc agtggctcac gcctgtaatc ccagcacttt gggaggctaa 001040 001041 ggtgggtgga tcacaagatc aggagttcgg ga |
Predicted Small Protein
Name | NONHSAT113344_smProtein_530:679 |
Length | 50 |
Molecular weight | 5366.202 |
Aromaticity | 0.0408163265306 |
Instability index | 75.9673469388 |
Isoelectric point | 6.46954345703 |
Runs | 9 |
Runs residual | 0.0216216216216 |
Runs probability | 0.0434650336611 |
Amino acid sequence | MMACPLTSLTGLPPHHSAQEMGLLTVSQTYQAHSHPQSLIYLPLPCHNI |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHLLEEELEEEEELLLLLLEEEELLLLLLL |
PRMN | - |
PiMo | - |