NONHSAT113517
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113517 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
475 nt |
Genomic location |
chr6-:72182901..72186691 |
Exon number |
4 |
Exons |
72182901..72182983,72183744..72183867,72185113..72185178,72186490..72186691 |
Genome context |
|
Sequence |
000001 GGCTAAGTCA CTTTATCTCT CCAGCCATTG AAAGCTTGGA TTAAATCATA GGCTTTAGAG CTAGGTTCCA TGGAGCTTTG 000080
000081 GAGTTCTGTT ATACCTGTCA CAGGATAGGG ACCATTGATA AAAGAGACTC TTAGCAGATG AGAATCTGGA CATCTGGGCT 000160 000161 CGGAGAAGCT TTGATTTTAC CTGTTTTTAT ACACTGATTT AAGGGAACCC ACACAATTAT ACAAAAATAA ATGAAACGGT 000240 000241 CTCCCTATAA TTGCATGGCC AAAGACCAGA GAGATCAACA GCAGTGTATT AGTCATATGT ACTCACAGAC CACGGGAGAG 000320 000321 GGACACCATG CCAACAGGGT CACATGGAGC CTGTGCTCAG GAACAGAGTG GATGACAAGG ATTGTGGGAG GCGAGATACA 000400 000401 GGGGTTAGAG CACAAATTGT GCAGTGCCCC TTAGCATTTG ATTTTTACTG AAAGATGGGA ACCCAGAAAA GGGAT |
Predicted Small Protein
Name | NONHSAT113517_smProtein_230:433 |
Length | 68 |
Molecular weight | 7610.528 |
Aromaticity | 0.0597014925373 |
Instability index | 46.7820895522 |
Isoelectric point | 7.72857666016 |
Runs | 10 |
Runs residual | 0.0059388919278 |
Runs probability | 0.0494788906553 |
Amino acid sequence | MKRSPYNCMAKDQRDQQQCISHMYSQTTGEGHHANRVTWSLCSGTEWMTRIVGGEIQGLE HKLCSAP |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHEEELLLLLLLLLLEEEEEELLLLEEEEEEELEEEEEEE EEELLLL |
PRMN | - |
PiMo | - |