NONHSAT113706
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113706 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1654 nt |
Genomic location |
chr6+:80283594..80285247 |
Exon number |
1 |
Exons |
80283594..80285247 |
Genome context |
|
Sequence |
000001 TTTTGCAAAT AACACAGTTT CAATTCTTCA TTTGCACCCT TTGTATGTTT TATTTGTGTA TTTCCTCTTG AATTCTCTAA 000080
000081 TTACTAGGTA CAAGATTCTA TGTGTGTCTG TTTGGGTCAG CTATTGCTGT TGTTGAGTAG GAAAAATAAT TTTTCTCCTG 000160 000161 AGCCCCTTAT AGTTCTTAGC TAGAACACCG CTAACAAAAA GCAGATTAAG AGGAGAAAAA CAAGTTTATT CATGCTTGCA 000240 000241 GAGCACATCA TGTGGGAGAA ACCTGCCTGA AAAGTAATTC AAAGCAGTTA TTTAGAACTC TGACTTAAAT TATTAACAGC 000320 000321 ATCTTCAACA AAGAACAATA AATTTGTGGA GAAATGACAG GACAAAGGAA AGTGGTTTTA GCCTTCCACA GGTGGGAAAC 000400 000401 TGTGGGAAGG GAATATATGG GGAGAAACTA ATGGAATGAG GTTTGTTTGC AGATTCTCTG GTGCCTTCTC TCCAGAAATC 000480 000481 AATTCATCAA TGAGTTGCTA AGTTATCTCC AGTAAAGGAG AATTTACATC CTGTCTTTGG GCAGAACAGC GGGGGATAGA 000560 000561 GAGAGATTTT CCTCTCTTTG TTGCTATTCA ATTGCCTTCA GCTCAAAAAT AATTTTTATG TCAAGGAAAC ATTTTTGGGG 000640 000641 TAAAATATTC TGGTTTTCTT CTCTGTGTAA CAAACTATTC TAAAATCTAG TGGTCCTTCA GTTTGGGGAG AAGAAAAAGT 000720 000721 TCTGGAGATA GATGGTGGTG ATTGTTATAA AACAATGTGA GTTTACTTAA TGCCACTGAA ATGTACACTT AAAAATGACT 000800 000801 AAAATGGTAA ATTTAATGTT ATGTACATTT TACTACAATA ACAGATCACT TAGTGATGTA ACAACAATTT GTTGGTGGTA 000880 000881 TATCTTATGA CTCTGGCATT AGGAATTTAT TCAAAGCACA GCAAATACAG GTCTTTGATG TCTGGGGCCC AGCTGGGATG 000960 000961 ACTCAGATGG TTGGGGGTTA GAACAGCTAA GGGCTGGCTG GACATCTCTC TCTTCTCTCC ACACAAGCCC CTCTAGGTGG 001040 001041 CTAACTTGGA TTTTTTCATA GCATAGCGGT CACAGGGTAG TTGGACTTCT TACATGGCAT CTCAGGTCAA CCAAAAATCA 001120 001121 AAATGAAAGC TGACAGTCCT TACAGATTTG TCCCTGAAGG AGTATGATGT CAATTCCACT GTACTTGATT GATCTAAGCA 001200 001201 GTCAAGGGGA AGGAAGAAGA CCTACCTCTC AATGGGAAGA ATAACAAAGA ACTACAGCCA TCTCTCATCA ACCACAATGT 001280 001281 CCATTTAGAT GAAGCTTTTT CAGTTCTTTT TTTAAAAAAC TATAGTCACC TTGCTGTATA GTAGAACTTT CGAACTTATT 001360 001361 CCTCCCACCT AACTGAAATT TTGTGTCCTT TGACTGGTAT CTCTTATTTG TTAAAATCCT GGATAGTCTT ACTAATGTTT 001440 001441 GTCTGACTGA TTTATCAGTT TATACGAGAG CTGAGTTAAA ATTTCCCATA CTATATTGGT GGGTTTATTA ATATCTTTTG 001520 001521 TAATTTTGTC AATTTTTAAG CTAAGAAGAC AGGTTTATAC TCATTTAAAA ATTTTAAAAT TTTCCTGTGA ATTGTACTTT 001600 001601 CTCATGTCAT ATAATGATGC TATTTATTCC CAATAATAAT TATTTTCCAA GGAC |
Predicted Small Protein
Name | NONHSAT113706_smProtein_794:889 |
Length | 32 |
Molecular weight | 3824.5333 |
Aromaticity | 0.193548387097 |
Instability index | 73.545483871 |
Isoelectric point | 7.78839111328 |
Runs | 5 |
Runs residual | 0.0399865591398 |
Runs probability | 0.0475711005123 |
Amino acid sequence | MTKMVNLMLCTFYYNNRSLSDVTTICWWYIL |
Secondary structure | LLLEEEEEEEEEEELLLLLLHHHHHHHHHHL |
PRMN | - |
PiMo | - |