NONHSAT114330
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT114330 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
560 nt |
Genomic location |
chr6-:108443540..108487058 |
Exon number |
3 |
Exons |
108443540..108443918,108486771..108486908,108487016..108487058 |
Genome context |
|
Sequence |
000001 AGAAAGTGTG AATATGGGAG TGTGGCTCTG TGCGTGCGTG ATGAGTGCCA GATAGATTCG CGGAAGAAAT TGGGTGGCTG 000080
000081 TGTGCTGGCG TGTGATTGTG CGCGCCGGAC ATGGCCATGT GAGTTGGTTC ATTCTTGGTC CGGTGCCCCT TCTGTTGGGT 000160 000161 AAAACTTGGA TCTGGCCCGA Gatgaagtct cgccctgtct cccagactgg agtgcagtgg tgcaatcaca gttcactgca 000240 000241 acctctgtct cctggattca agcgattctc ctgcctcagc ctcccgagca gctggaacta taggcgcaca ccaccatgcc 000320 000321 tggctaattt ttgtattttt agcagagatg gggtttcacc atgtcagcca ggctggtctc gaactcctga cctcaagtga 000400 000401 tctgcctgcc ttggcctccc aaagtgctgg gattatagtc atgagccact gcacccggcc catcctcaaa ttttggtatg 000480 000481 aggtggtgtc ctggaatcaa tcccccatgg ataccaaagg atgactgTAC TGTATTCCTA GCATGAATTC AGTATCAATC 000560 |
Predicted Small Protein
Name | NONHSAT114330_smProtein_347:523 |
Length | 59 |
Molecular weight | 6374.2629 |
Aromaticity | 0.0862068965517 |
Instability index | 58.7775862069 |
Isoelectric point | 6.22015380859 |
Runs | 10 |
Runs residual | 0.01582038651 |
Runs probability | 0.0535594417948 |
Amino acid sequence | MGFHHVSQAGLELLTSSDLPALASQSAGIIVMSHCTRPILKFWYEVVSWNQSPMDTKG |
Secondary structure | LLLEEELLLLLLLLLLLLLHHHHHLLLLEEEEELLLLHHHHEEEEEELLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii |