NONHSAT117410
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT117410 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
617 nt |
Genomic location |
chr6_mann_hap4-:2840936..2841627 |
Exon number |
2 |
Exons |
2840936..2841441,2841517..2841627 |
Genome context |
|
Sequence |
000001 TCCCTCCAGG TGGCCAGAGC AGGCCGGTTT GGCACCAAGG GCTTGGCTAT CACATTTGTG TCCGATGAGA ATGATGCCAA 000080
000081 GATCCTCAAT GATGTGCAGG ATCGCTTTGA GGTCCTCCCT GTTCCTTAGT GTGTTTGTCC TAAATCCCAT CACATAGGTC 000160 000161 ATGGGCATCT GATGCATAAT GGACACTTGA CTGGTTCATG CCCCCTGGTC TTTGATGCTG TGTTGGGATG TTTTTCTGAC 000240 000241 CTTTATGTGG GGTTTCTGTC TTCTCTCATC ATATTACATC CCTTCCCTCA CCCCCACGTC CGTCCTCTGA ACCCAGGCAG 000320 000321 TACACCAGTG TCTGCATGTG TGCCGTGTGT TCCTGCCTCA CTTTCCCCTT TTCATGCCTT ATTCTGACCA TGCTACGTTT 000400 000401 TCTTCTCAGT TGAACAGACA CGGTAGAAGA CTCGCCCATT TTGGAATGTG ACCGTCTGTC CTTCAGGAGA GGACACCAGG 000480 000481 GTGGGGGTGA AGGAGACACT ACTGCCCCCA CCCCTGACAG CCCCCACCCC ATGGCTTCCA TCTTTTGCAT CACCACCACT 000560 000561 CCTGAACCCC CATTTCTGAT TTGTCAGAAT TTTTTTTTAA CAAAACTAAA AATGAAA |
Predicted Small Protein
Name | NONHSAT117410_smProtein_335:412 |
Length | 26 |
Molecular weight | 2813.553 |
Aromaticity | 0.12 |
Instability index | 86.84 |
Isoelectric point | 7.66644287109 |
Runs | 5 |
Runs residual | 0.00830188679245 |
Runs probability | 0.0496025437201 |
Amino acid sequence | MCAVCSCLTFPFSCLILTMLRFLLS |
Secondary structure | LEEELLLLLLLHHHHHHHHHHHHHL |
PRMN | LLLLHHHHHHHHHHHHHHHHHHHLL |
PiMo | ooooTTTTTTTTTTTTTTTTTTTii |