NONHSAT118120
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118120 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
555 nt |
Genomic location |
chr6_qbl_hap6-:3216790..3220520 |
Exon number |
6 |
Exons |
3216790..3216864,3218259..3218404,3218507..3218576,3218884..3219001,3219938..3220020,3220458..3220520 |
Genome context |
|
Sequence |
000001 GCTATCAGCG GCCAGCGCGG GCGCGGCCGG AGACCGTGGG GCCCCCGGTT GCCGCCCCCT CGGGAGCCAC CATGTTGGTG 000080
000081 ATACCCCCCG GACTGAGCGA GGAAGAGGAG GCTCTGCAGA AGAAATTCAA CAAGCTCAAG AAAAAGactg taagcttctt 000160 000161 gagggtagga acaatgcatt agcctcctgg atatccctgt tacgaagtca tggctgggcc tcattcaata tgcaggaaat 000240 000241 agatggatGA AGCTTCCAGG AAAGAAAAAG GCATTGCTGG CTCTGAAGAA GCAAAGTAGC AGCAGCACAA CCAGCCAAGG 000320 000321 TGGTGTCAAA CGCTCACTAT CAGAGCAGCC TGTCATGGAC ACAGCCACAG CAACAGAGCA GGCAAAGCAG CTGGTGAAGT 000400 000401 CAGGAGCCAT CAGTGCCATC AAGGCTGAGA CCAAGAACTC AGGCTTCAAG CGTTCTCGAA CCCTTGAGGG GAAGTTAAAG 000480 000481 GACCCCGAGA AGGGACCAGT CCCCACTTTC CAGCCGTTCC AGAGGAGCAT ATCTGCTGAT GATGACCTGC AAGAG |
Predicted Small Protein
Name | NONHSAT118120_smProtein_71:181 |
Length | 37 |
Molecular weight | 4127.9134 |
Aromaticity | 0.0555555555556 |
Instability index | 74.25 |
Isoelectric point | 9.69805908203 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0306861483333 |
Amino acid sequence | MLVIPPGLSEEEEALQKKFNKLKKKTVSFLRVGTMH |
Secondary structure | LEEELLLLLHHHHHHHHHHHHHHLLLEEEEEELLLL |
PRMN | - |
PiMo | - |