NONHSAT118730
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT118730 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1563 nt |
Genomic location |
chr7+:1580047..1581609 |
Exon number |
1 |
Exons |
1580047..1581609 |
Genome context |
|
Sequence |
000001 ggcgggcagg cgggtgggGG CACACCCCTC GTACCTGTCA CTGGGATGCA GACTCTCGAC ATCCGAGTCC AAGCGCAGGC 000080
000081 CCCTCGGGCG CAGGCAGCTC ACACCAGGAA GAGACTGTAT TGCAGGGTGA AGAGTGGGCT CCCGTGGGCC CAGAGCTGCA 000160 000161 CGCCGGTCCA CAGACACACT CACGCCCGCC ACCTGCTCCC CGCAGGATGT GTCTGTGTGT GGGAATTGGT ATCTTGCACC 000240 000241 CGTGGGAGTC GGGACATATA ATGGAAAGGC CCTCGGGAAG TTCCGCGTCC TCTGTGGGGG CTGCCGGAAG ACACGGCCCC 000320 000321 AGGAGTCAGG CCCCTGTGGT CAGGTCTAGC ATGGGGCTTG TTTTCCACTC CTGCTGTAAG CAGCCTTCGA CACCTGTCCT 000400 000401 GCCACGGCCT CCCAGCCGGT GCGGGAGCCC CTCACTGCCC TGACCGACTC CGCAGTCCCC GGGGAGGAGC ATGGATGGTG 000480 000481 TGTCGGCAGC TCCGTCCTTC CAGCTGTCCC GTTGCAGTGC CCGTGATCCG CGTCTGCCTT AGCAGGGGCC TGCGTGAGTG 000560 000561 GGCACGGTGT GGGAGGTCGC CTGCGTGGGG TGGTGTCTGT GTGTGTGCAC GCACGCCTGC CATCAAAGCA GCAGGGCTGA 000640 000641 GGGGGTGCAG CTTGCTGGTG TTCACTGGGG GAGGGCCTGT GGGCACACAT GGCAGAGAGA GTGGCTCACA CGTCGTGAGG 000720 000721 TCTCCCCTGT GCTCTGGTGA CCCGAGGAGG TCGTGCAGCA CAGCGCAGAA GCCCCTGCCC ACGGGATCCG GCCCCCCAGA 000800 000801 CACCGACCCC ACAGGCCGTC CCGGATCTCA GCGGACACAG GCAGGAGCGC CCCATCATTT GACGGTGAGC AGGACTCAGG 000880 000881 CTGTGTGTCC TGGAGCTACT TCTCACCAAC TGTGGTCAGT GCAGGGGGAA CGAGGAGGTC TTTTGGGGGC CTGGCGAGGG 000960 000961 GAAGGGCTGC TGCAGTCTAG GGAGAGGGGG TGCAGCCTGG GGGATGTTGG TGGACATGGA TGTGGAGGTG GAAGGAGGAG 001040 001041 GACGTTGCGT GGAGTGGTGG GAGGAGGCGG GAGCCGTGTG CGAGAGCAGG TGGAAAGCCT TGAGGGGCAG GACCAGGATG 001120 001121 CAGCTGGCTT GTAGAAGAGC TCAGGAGTGA GCCTGGCACT CCAGAGGGCG CGGCGGGTGG GGAGGCAGCA GGCACCAGTC 001200 001201 CAGGAGAGCT TCGTGGACGT GGCTCCTGCG CGCACACCCC CAGGAGCACA GCCACGGGCT GCAGGTGTGG CTGGCCTCAG 001280 001281 CACTCAGTCC TCACCCGGAG CCTTTGCCTG CTCCTCCTTC CAAGAGCACT GAGGCACCAG TGGGCTTGGC ACTCCACCTT 001360 001361 GGGCTTCCTT TTCCTGGAGA GCCGCCTTGA GGGTCCCTCC TGTGACTGGG GTCTCTGCAG CGAGAGCCGC GGGGGTTGCG 001440 001441 GAGCCCCTGC CTGGGGGAGC TGGCGGAATG TGAGCCGCCG GCCGGGGGCC GCCACATAAG ACCTGCAAGG TGGTGCCTGG 001520 001521 GGCCCTGGCT CCTTCTCGGC TGCCCCTGCC CACCCAGTAA CAG |
Predicted Small Protein
Name | NONHSAT118730_smProtein_206:442 |
Length | 79 |
Molecular weight | 8075.305 |
Aromaticity | 0.025641025641 |
Instability index | 83.5282051282 |
Isoelectric point | 9.47943115234 |
Runs | 11 |
Runs residual | 0.0073483427142 |
Runs probability | 0.0304315010197 |
Amino acid sequence | MCLCVGIGILHPWESGHIMERPSGSSASSVGAAGRHGPRSQAPVVRSSMGLVFHSCCKQP STPVLPRPPSRCGSPSLP |
Secondary structure | LEEEEEEEEEELLLLLLEEELLLLLLHHHHLLLLLLLLLLLLLEEEELLLEEEEEELLLL LLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |