NONHSAT118792
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT118792 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
3745 nt |
Genomic location |
chr7+:2412753..2420375 |
Exon number |
5 |
Exons |
2412753..2415162,2416585..2416710,2418324..2418877,2419029..2419146,2419839..2420375 |
Genome context |
|
Sequence |
000001 GGACATACTC CTGCCAGTCC CCAGTCTGGG TCAGGTGCCT TTGACCAGGG TGCGCAGAGC TGTTGCACAC AGCTGTACTC 000080
000081 TGCCCCCGTG CACCCGGTTC CAGGGGTGCC ACACTGCACC CACCTGGGGC TCGCTCCTCA CAGTGGTGCG TGGGCCCTCG 000160 000161 CCTGTCTCAC GGCACCTGCT GCCTGTGCCC TCAGCTCCTC ACTTCATCCT GGGGTCTCTG CTCAGCACAG AGCCCGGTGC 000240 000241 CCGCGGGGAT TGAATGAGCC ATTGCTTGTT GCTTCATAGG CGTGGGGTGT GTGTGTGTGG TAGCCAGGAG GTGGCGATGG 000320 000321 GCTGTGTTCC TCACACAGGA CTCTGGCTGC CAGCTGCCCT CCTGCAGAGC CATGGGTTTG GCTCTGTACC AGGAAGGGGT 000400 000401 TGGAATCTCC TGGCCGCACC TTTCGCAGCA TGATTCTGTG AGGAGTTTAG TTTTCACTTT GCTAGAGCTT GGCAGGGTGC 000480 000481 GTGGTGCCCT CAGTTGGCAG TGGATTACAA GATTGGCTGT TTCATTAATT CTGGTTGATA GAAACATATG GGCAATTGCA 000560 000561 GACTGTCCAG AGACTTGTGT AAGTCTTCTA GGTCATAAAA CATAGGCAAG CAGAGGCACC TTGTACCTTC CAAACATGCT 000640 000641 GCGTGACACG CCTCTCCTGA GGTTTGGCAT GGACGCTGGG GCCACCGCAT GGGCTCCATC CCATGCCCGT GGCTGTTGGG 000720 000721 GTTTTCGCTT GTGCAAGTCT GAGACCCCTG CCCCTGCCAG GGTGCACTGC CCTCCCACAT CTCCTCCCCT CCTCCCCACG 000800 000801 TCAGCCTGCC CCATGCCTCT TTTTTGGATG TACCACAGGC TGAGGGGAGA GAGGCCACAG GTTGTCAGCT CTGTTTGAGA 000880 000881 TGCAGGGAGC ATATGCTCTG AGGGGGACTT GAGCCAGCCC CAGCTGGCCT TCACTTCTCA CTGTTCCAGC GGCTCTGCCC 000960 000961 GAGATCCATT CCGGAAGTAA GAGTTAGTAC CTGCAAAGAT GATGACTGTA GTCAGTTTCA ACAAGCATAC AGCTTATCCA 001040 001041 AAGACGCCTT GTCGCTAGGA GAGTGGCTTT GGTCTTTTGG GGTCACACGT CTCTGACATC TCTCTGTTGG GGTCCCTGCA 001120 001121 GCAGTGAACA TTTGCTGTAA AGGGAATTCT TTGTCCAGTT ACCTCAGGAA ATAAGATAGT ATTGTTTTGA AATACCCCTG 001200 001201 TCGCATCTTC TTTTTTTTCC CATTTAAAGT ATGGATCATG ACTTAGGGGG TACTTGGCGA TGGACTTTGT AAAATTGTTT 001280 001281 TCCGAGGTGG TCCAGCATTA CCAGCTCTGC CCTCATGGGC AGCATGAGCA CGGCCAAGTC CTCCAGCCTT GGCTGCCCCG 001360 001361 GCACTGTGGA AGCCCTCGCA GCTCGTGACA GGCGCGCTCT TTCCTTTCAG AGATGTTCGA CAAGCAGCAG GCGAACACCA 001440 001441 TCTTCTGGAG CCCCCAAGGA CAGTTCGTGG TGTTGGCGGG CCTGAGGAGG TAGGTGTCTG CGCTCTGAGC CTGTCCGCCC 001520 001521 TGTGAGTAGC GCTCTGCTGT GGCAGAGACC CCTCAGGCGC CTGCACCCGG CTTCTTGGTA GAGAGAGTAT TGTGCGCTGA 001600 001601 AAGGGTTGCC CCAGTGTCAG TGGATAGGAC TTCATTGAAC CTCTGCAGAC CCACGGTACT CCAGGACTCA GGCCAAGCCC 001680 001681 GCACAGAGTG AAATAAGCGC TCCCAGATGC TTTCGTGAAG TGACCAGGCA GACCTGTCTG CGGGTTGTGG TTCTCTGTGG 001760 001761 TTAAACAAGT GCCTTCCAGC CATCCAGTAA CCTCCCCCCG GGGGTCAGTC CCTTGTCTTC TAGTGGGAAG GGTATTCGTT 001840 001841 ACACAGCTGT GAGGCTGCCT TACCTTTGTG GTTGGTGTCA CGGTGTCGGT CTCAGCTGTG TTCCAGCAGT GTGTCGAAAT 001920 001921 CATGGAGAAG CTTCCAGCTT TCTGCTCTGA GTTAAAAGAA TACCCTTTTG TTGCTGCTCT CCCTTGCTTC ATTGTCCACA 002000 002001 CTTGCTACTG TATTTTTGGA GGCTTACTTA GCCTCAGATA ACATTTCCAG TAAAAATAAT ATGATGGCAG TCATATGTAA 002080 002081 TACTCACTGC ACACTCTGCA TCTGTGATTT GGTAAGTCTC ACAGCGGCCA CCAGAGGCTG TTGCTGTGCT TGTTTCCATG 002160 002161 TTAACGCCGA GGCTGGCTCC CTGGGGACCC CATGCCGCAG CACCTCTCAG GAGTGGGATG CCAGGAGGTA TGCGTCTCCA 002240 002241 TGAAGCCTGA CGGTCCTGTC TGTCTTTGCA GTATGAACGG TGCCTTAGCG TTTGTGGACA CTTCGGACTG CACGGTCATG 002320 002321 AACATCGCAG AGCACTACAT GGCTTCCGAC GTCGAATGGG ATCCTACTGG GCGCTACGTC GTCACCTCTG TGTCCTGGTG 002400 002401 GAGCCATAAG GTGGACAACG CGTACTGGCT GTGGACTTTC CAGGGACGCC TCCTGCAGAA GAACAACAAG GACCGCTTCT 002480 002481 GCCAGCTGCT GTGGCGGCCC CGGCCTCCCA CACTCCTGAG CCAGGAACAG ATCAAGCAAA TTAAAAAGGA TCTGAAGAAA 002560 002561 TACTCTAAGA TCTTTGAACA GAAGGATCGT TTGAGTCAGT CCAAAGCCTC AAAGGTGAGC CTCATTCCCA AAATGAGGGC 002640 002641 TGTGCTGTGA CATCCGCCAT CATGGCAAAG GCGGGGCTGC GGGGAGCTGC TGTGTATGTG CTCAGAGTTG CCTCTGCTCC 002720 002721 GAAGACACTG GTTCTGTTCC CCCCCAGGAG GGATGCACTG GGGAACTGGG GTTGGCACGG GGACTTGGAG TTGGTGACCT 002800 002801 CACTGCTGCC TTGTGGGTGG GGGGCAGCGT TGGGGGAAAA GTGAGAATGA ATGGACTAGC CATTCCTGCT TGAGTGCCTC 002880 002881 TGTATGCTGT CCTTCTGGCA CCGTCCGCCT GGGTGTGGGC TCTTCGCGAT GGGGAGGCAC TTGTCTTACC AGTTCTGTGC 002960 002961 TTTCCCCAAC CTCATGCATA GGAATTGGTG GAGAGAAGGC GCACCATGAT GGAAGATTTC CGGAAGTACC GGAAAATGGC 003040 003041 CCAGGAGCTC TATATGGAGC AGAAAAACGA GCGCCTGGAG TTGCGAGGAG GGGTGGACAC TGACGAGCTG GACAGCAACG 003120 003121 TGGACGACTG GGAAGAGGAG ACCATTGAGT TCTTCGTCAC TGAAGAAATC ATTCCCCTCG GGAATCAGGA GTGACCTGGA 003200 003201 GCACTGTGGG GACGGACTCC GCCTGCTGTT CCCGCGCTGA GCTACAGGAC TCCCGAGTGT GAGCCGCGGT TCCTCTGTTG 003280 003281 CAGCGCAGCC GTGTGTGCTG TGGAGCCGAG GCCGTCCTGC AGGAAGCCGC GTGACTCCCG CCTCCTCCCT GTGCTCTCTG 003360 003361 GCTCTGGACT GTGACTGCGC CTGGATTCTG CCATTGCGAC ACATTTTTGT GCCTTTCAGC CCCTGGTGTC TGCAGTGGGG 003440 003441 GATTTAAGGC ACCCGCTTCC ACTTCTTTCT TGTTTGGAGT TTTCTGTTGG AACCGCCGGC GTTGGCTCCG AAGACTTAGC 003520 003521 GACGCCACTG GCGGCACCTT CTCCTGCGCC CAGTGATGTT TCCACGGTGC CTGTACACAG CCGAGCAGCA TTTCCGTTGA 003600 003601 AGGACTTGCA TCCCCATTGC GGGCAGTGCT GGACGTGTCC CGGAGACCCA CCGGGAGGGC GCCGCCATGC CTTGTACCCC 003680 003681 CACCGTGCAG GTTGTGGCCG GTTTTCTCCG CAGGTTGAAC ATGGAAATAA AAGCAAACTT GTATG |
Predicted Small Protein
Name | NONHSAT118792_smProtein_635:877 |
Length | 81 |
Molecular weight | 8873.3332 |
Aromaticity | 0.0875 |
Instability index | 66.6375 |
Isoelectric point | 9.68353271484 |
Runs | 11 |
Runs residual | 0.00131578947368 |
Runs probability | 0.0355944179473 |
Amino acid sequence | MLRDTPLLRFGMDAGATAWAPSHARGCWGFRLCKSETPAPARVHCPPTSPPLLPTSACPM PLFWMYHRLRGERPQVVSSV |
Secondary structure | LLLLLLLEEELLLLLLLLLLLLLLLLLLLEEEELLLLLLLLEEELLLLLLLLLLLLLLLL LHHHHHHHHLLLLLLEEELL |
PRMN | - |
PiMo | - |