NONHSAT119157
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119157 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
966 nt |
Genomic location |
chr7-:8382797..8394033 |
Exon number |
3 |
Exons |
8382797..8382916,8383337..8384124,8393976..8394033 |
Genome context |
|
Sequence |
000001 TACTGGTTAC CACTCTGTGT GTAGCCAAGA TGAATCTTGG GGCATTTTTG AACCCATCCC TGATGAAATT TTCAGGCTCA 000080
000081 TTTAACCAGT AGTCAAATGA CCAGGAAACC AGGTGGGAGC TACAGACCAA GATATTTTTG GATAATAGGA TGCTAAATGG 000160 000161 GAAAGACAGA TTAGTTACAA GCATTTGATT CTCAACAGAT TTCGTGTCTC CCTCTCTACC CCCATTCCAA TAACTATGTC 000240 000241 TGCTAGCTAT TGAATAACGG GGTTTAAAAT CTCCTGGACT ATTATCATAG CTGCAGTAGC AATCTTTTAA CACGGTGCTT 000320 000321 GCTCATTCAA CCCCTATTAT AATTTTCAGT GAAGTAAAAT ATCACAAAGT CATTCAAATT CATAGACTAA AGATATATCT 000400 000401 ATAGTGACAA AGTAAAGTAT AGGATAAAAT TCATTATCCT GATAAATTGA TGAACATGGA CAGTCACTCT GAATAATTTG 000480 000481 AGCCAAAGGA ACTTTTTCCT CTCAATGGTT GGATATTTTT GGCCTGATTT ATCCACATAA TTGCCTCAGC TCTTCATTTC 000560 000561 ATTTTGCCCA TGTCAACACA ACAAAGTCTC TGTACTTGAT TTTTGAAAGC TTCAGTATTT CATGTCACGT TAGCAAGTGA 000640 000641 GACGCACATA GCAAATTCTG GATGGGGTTC TTGTGACAAA TGACTTCTAT GGTTTGCACG TGTCTCCTCA ATGACAGCTG 000720 000721 CTGGGAAGAA ACATCACCTC CCAGCTGCAC AACTTGATCC CTCTCTCCCT TGTGAATTAG GAGGAATTGA ATGTTTGGCT 000800 000801 GTAAAGTGGC ACTTCGCACT ACTCTCGTTG AATATCACAA TTGTGCCTCA TTCACTCTTT CAACCTTTTG TGCGCTTGTC 000880 000881 CGTTCATCTG ACAGAATTTA TTCAAGACCC TCAATGTGCC AGGACTTGTG GTAGGTGTTT CCACATCATT AAATGAAGAT 000960 000961 AATTGT |
Predicted Small Protein
Name | NONHSAT119157_smProtein_710:955 |
Length | 82 |
Molecular weight | 9016.5927 |
Aromaticity | 0.0740740740741 |
Instability index | 54.1320987654 |
Isoelectric point | 8.38116455078 |
Runs | 13 |
Runs residual | 0.0183141198594 |
Runs probability | 0.040146481323 |
Amino acid sequence | MTAAGKKHHLPAAQLDPSLPCELGGIECLAVKWHFALLSLNITIVPHSLFQPFVRLSVHL TEFIQDPQCARTCGRCFHIIK |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLEEELLLLLLLEEEEEELH HHHLLLHHHHLLLLLEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLL LLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiii iiiiiiiiiiiiiiiiiiiii |