NONHSAT119450
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119450 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
728 nt |
Genomic location |
chr7+:21600709..21610334 |
Exon number |
2 |
Exons |
21600709..21600788,21609687..21610334 |
Genome context |
|
Sequence |
000001 CAAAATGGTT AAGATCCTGA CAACTAAACA AAGCAGCTAT TTTCCTACTC TGAAGGACAT TTTTCTGGCT GTGGAAAATG 000080
000081 GCAACAGCTT ACCTTTCACC TGAGGACCTT TTGAGGGGAG AAATAGAAGA GTCACTGGAA AAGGTGCAGG TGGCTGTTAA 000160 000161 CATCTTAAAG ACTTTCAAAA ACTCCTTTTT CAACTATAGA AAAAAATTGG CAAGCTACTT TATGGGAAGA AAGCTGAGAC 000240 000241 CATGGGATTT CCAGTCTCAT CTGGTGTTTT GCAGATTTGA CAAGTTTCTT GATCGTTTAA TAAAAATAGA GGTATTCATT 000320 000321 TTTTGATTTT ATTTATTCAT GTTGAAGGTG GGTGCAAAAA GCCAGTAGCT TTTCACATGA TTCATGGAAC AGTTTACTTT 000400 000401 ATATCATAGG TGGAGGTCTC CTTTCTCAGT GATTCTCATA AGGAGCTCAG CAGGCCAATG CTATGATGAT ACAAGGGCAT 000480 000481 TTTTTAAATC TTTAATTTGG ATTTTTTAAA AGTTCATTTT TGATTCCATT ATTACATTGA GTATAAGTAA ATCTCTTTAT 000560 000561 GTATCAGTGA CTCTTAGAAT TGACTAATCT GAGAGAGAGT TGTAAGTCAG GAAGCAGTAA GCTCATCCTC TGTAAATAAA 000640 000641 TCCACTTTTC CTTTTGTATA TTTAATGCTT AAAATTGGTA TTTCATACCC TAAAACCCAT TGCATAATTT AAATTATCAC 000720 000721 ACTTTTTT |
Predicted Small Protein
Name | NONHSAT119450_smProtein_77:325 |
Length | 83 |
Molecular weight | 9887.5073 |
Aromaticity | 0.170731707317 |
Instability index | 47.5146341463 |
Isoelectric point | 9.41424560547 |
Runs | 9 |
Runs residual | 0.0261456023651 |
Runs probability | 0.0212369231977 |
Amino acid sequence | MATAYLSPEDLLRGEIEESLEKVQVAVNILKTFKNSFFNYRKKLASYFMGRKLRPWDFQS HLVFCRFDKFLDRLIKIEVFIF |
Secondary structure | LEEEELLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLL LLLLEEHHHHHHHHHHHEEEEL |
PRMN | - |
PiMo | - |