NONHSAT119874
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT119874 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1130 nt |
Genomic location |
chr7-:30555928..30601744 |
Exon number |
4 |
Exons |
30555928..30556128,30563983..30564102,30590252..30590397,30601082..30601744 |
Genome context |
|
Sequence |
000001 TTTTCCTAAA ATTCCCTTTT CCACTGGTGT GTGGTGCAAG ATGAGGCACA TTTTCCATGG ATGGTGAACA GAGGGAGGAG 000080
000081 CCTTTTGATC ACAACCAGGT CACCCCACTT CTAAGCCACT GTGCCTCCAG CCCCACAAGA CTAAGGAGAG AGAGCGCAGC 000160 000161 GTGGTGGAGA GTGAGCTGTG CTGGGACCAT TGTTTCCGTA ACCTCGTTTT CTGTGTCCAG CTGACACACC TTCAAAGTGG 000240 000241 CATCAGGTCC TAAACTGTAG CTTGCAATGT GCCTGTTTCC AGAAACCAAG GTGAAAGTGC TTTTAGACAG TGTTCCCATG 000320 000321 CAAGAGTCCC TTCCCAGCTT TTTTCTGGAA ATGCATGTTT CTCTGAACTC TGAGTCCCAA GAAAAATCAC TTGAGACACC 000400 000401 AAGAAAATGG GGGAAGTGCT AAAATTGTGT GGGAATTCAA GCTTAACAAT AAACATCAAG ACATTTTTGA TAAAAATGAA 000480 000481 TCCACTGACA TCGGGGAGGA GCAAGAGAAC AGCACGCTGA CACTGGGTCA GAGGCTAAGA CCGACATTTC TGGGAACCAC 000560 000561 TCCCGGAAGG GCACAGAGGA GACGCTTTCA GCCTCTCATC AGCCAGCCTG GCCTGTAGCT GCTGCACGTT ATGAGTGTGT 000640 000641 TCCTGGCATG ACTGCTTCTA ACAAAGAAAT GCTGAGGCAG TGTCACGCTG GTGTCTGTCC TCCTTACAGA ATGCCTGAAC 000720 000721 AGTTCCATTG ACTCAAAGTG AAGATCAAAA GAACCAAATG ACAGCAATAG CCAAGTGTAA TCATCAGTAA CCCTGTGTTC 000800 000801 TATCCACAGT TAAAAGAATA TTGGCAGAGA AACAGCCTTG GTGTTCCAGC AGGAGTGAAG AGGAACAGGA AAACGAGTGG 000880 000881 CAGTAGCCCT GAAACAGCCA CTTCTGGTGG TTGCCACTCA CCTGAGGATG TGGGGTCTTG CCATTTGCCC AGGCTGGTGT 000960 000961 CAAACTCCTC AAGTAATCCT TCTGCCTCGG CCTCCTAAAG TGCCAGGATT ATAGGCCTGA GCCACTACAC ACAGCCCGGA 001040 001041 GTTTTTAAAA AATACTCAAT TAAAATGCTT CATTTAAGTG TATGTCTCTA AGAAAATTTA ATAATTGATT AAATATTGTT 001120 001121 GAATAGACTG |
Predicted Small Protein
Name | NONHSAT119874_smProtein_56:223 |
Length | 56 |
Molecular weight | 6107.6972 |
Aromaticity | 0.0727272727273 |
Instability index | 60.8509090909 |
Isoelectric point | 6.01177978516 |
Runs | 8 |
Runs residual | 0.00606060606061 |
Runs probability | 0.0452989754461 |
Amino acid sequence | MDGEQREEPFDHNQVTPLLSHCASSPTRLRRESAAWWRVSCAGTIVSVTSFSVSS |
Secondary structure | LLLLLLLLLLLLLLLLLLLEELLLLLLHHHHHHHHEEEEELLLEEEEEEEEEEEL |
PRMN | - |
PiMo | - |