NONHSAT120464
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT120464 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
548 nt |
Genomic location |
chr7+:45822293..45828413 |
Exon number |
2 |
Exons |
45822293..45822745,45828318..45828413 |
Genome context |
|
Sequence |
000001 CCAGTCTCAT GTTGAAGATT TTTATGTAGA AGGCCTTCCC AAAGGAATTT TTTTTTTTTT TTTTTTTTTT TTTGAGATGG 000080
000081 AGTTTTCGCT CTTATCGCCC AGGCTGGGGT GCAATGGTGC AACCTTGCTG GTCACTGCAA CCTCTGCCTC CTGGGTTCAG 000160 000161 GAAATTCTCC TGCCTTAGCC TCCCAAGTCG CTGGGATTAC AGGTGCCCAC ACCACACCAG GCTAATTTTT GTATTTTTAG 000240 000241 TGGAGATGGG GTTTCACCAT GTTGGCCAGA CCAGTCTTGA ACTCCTGACG TCAAGTGATC TTCCCGCCTC GGCCTCCCAG 000320 000321 AGTGCTGAGA TTACAGACAT GAACCCATGC CTGGCCAGGA ATTTTGTTTT TTAGGAAGGC TTTCTACTAA TGGAATTCCT 000400 000401 GGCCTTGAGA GGATATTACT TTCGAAGGAA AGGATTTTTT TGTTATTAAA AGAGCCACCT AAGCTGAAGA TTCCCTTGAG 000480 000481 AACAAGTACT GTCCTGTGGT TTCATGGCCT TTCTTCCATT TGTGGTTCTT GTGAAGTGGA ATTTAAAT |
Predicted Small Protein
Name | NONHSAT120464_smProtein_113:373 |
Length | 87 |
Molecular weight | 9795.2482 |
Aromaticity | 0.116279069767 |
Instability index | 59.35 |
Isoelectric point | 6.88018798828 |
Runs | 13 |
Runs residual | 0.0115411315515 |
Runs probability | 0.0452216922805 |
Amino acid sequence | MVQPCWSLQPLPPGFRKFSCLSLPSRWDYRCPHHTRLIFVFLVEMGFHHVGQTSLELLTS SDLPASASQSAEITDMNPCLARNFVF |
Secondary structure | LLLLLLLLLLLLLLLEEEEELLLLLLLLLLLLLLLEEEEEEEEELLLEEELLLLHHHHLL LLLLLLLLLLEEEELLLLHHHLLLLL |
PRMN | - |
PiMo | - |