NONHSAT120968
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT120968 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2899 nt |
Genomic location |
chr7-:63484803..63490559 |
Exon number |
5 |
Exons |
63484803..63487382,63488169..63488290,63489664..63489739,63490375..63490475,63490555..63490559 |
Genome context |
|
Sequence |
000001 AGGGGCTGTG ACATATCACT GGGCCTATAA CCTAGGTAAT GTGACTCTCC TTTTCTTCCT GTGTTCTGTC CCAGTGAAGA 000080
000081 TTATGACAAA TTTCTGGGCC AATCAGGTGG TTTGGTGACT CTCAAACCAT GATTCAGCAG ACCTGTGAGG CTGTGAGTTC 000160 000161 CCTATCAGAA CACAATCTGC AGATGGAGTC TTGCTCTGTT GCCCAGGCTG GAATGCAATG ATGCAATCTC AGCTCACTGC 000240 000241 AACCTCCATC TCCCAGATTC AAGTGGTTCT CCTGCCTCAG CCTCCCAAGT AGTTGGGACT ACAGGTGCTG CCTTCAGGAG 000320 000321 GGATTGTGAC ATATGCCTGG ACCAAACACC TGGATGACGT GACACTCCTG CATGAGCCTT GCCCTAAGGG GATATTTTTA 000400 000401 CATGTTGGTG AACTCAGCGT CTAGGTGATG TGACTCTACT CTTCTACCTG GGCCCTGCCC ACAGAGGGCA TTGGAACATT 000480 000481 TCACTTGGCT CAGCACCAAG AAGATGTTAC TCTCCTACCT GGACCTCTCC CACAGGGGAC ACCTAGATGA TATGATTTTT 000560 000561 CTTCCTGGTT CCTGCCCAGA CTTCAAATTG TGATGTATAT CTGGGCCCAA AACACAGGTA AGGTAATAAC TCTCATAGCT 000640 000641 AGACCAAGAC AATAGAGAGA TTTTGACTTT TGTAGCTAGG CTTAGAACAA TGGGTACATA TTCCTGGCCC AGCTCCCAGG 000720 000721 TGATATGACC CTCCTACCTA GTTAGTGCTC ACAGGTGTGA TTGTTACCTA TGTTTGGACT CAGTTCATTG TGAGCATTGT 000800 000801 GATCACTCAT ACCTGGACCT AGCCACAAAA AAATATGTTG ACTCTTATAC CTCAAAATAG GAGACTCAAC CCACAAGAGG 000880 000881 TGTTGACTCT TAAACCTTTT GCTGGAAAAT GTCCAGGATT GTGAATTTCT GCTATTGATT GGGTCCAGGT ATGAGTTTCA 000960 000961 TTGCTGTGCC TGAGCTGAGT TCAAAATAAG TCACTATCTC ACCTGTGGCT GCATCTACAT ATGACAGTCA CAATTCCAAG 001040 001041 TCTGGATTGC ATTTGTGTGT GAGACTTAGG ACCTCACCAG TAAGCACTGT CTATGTGTGA GGGTGACAAT TCTATCAGCT 001120 001121 GGAAGTGCAT ATGAGAGTCA CAATGTCACC TTTGTTCTTG GTCCTGTTAT GACATTGTAT CACTTGAAGG CTTTATCCAG 001200 001201 ACCCAGGACC TTGCCTGTTG CCCTAAGCCT AGATATCAGA GTCAAAATCT GTTCTCTTAG CTGGATCCAG GTATGAGAGT 001280 001281 CAACATCTCA CCAGTGAGCT GTGACCATGT ATATGTCACA ATTTCACCTG TGGGCAGGAA CCAGACATGA GAGTCATATC 001360 001361 ACTTGGGTGC TGGGTAAGTG ATACATTACA ATTCTTACTT TGGGCAGGGT CCAGGCAACA GAGGAGAGAC ACATCACCTA 001440 001441 TATGATTGGC CCAGCGATGG GTGAAAATCC TCTCTGAGAG CAGGGCCCAT TCAGGAGAGT CATATCACCT AGCTGCTTGG 001520 001521 CCAAGTGAAA TATCACAATG CACCCTTTGC ACAGGGCCAA TACAGGACAG TTACATCACC AGGGAGCTGG GTCCAGCTAT 001600 001601 ATGTCACAAT TCCTTTTGTG GAAAGTGTCC AGGCAGAAAA GCAGAGTCAC ATCACCTAGC CAGTGGGCCC AGAGAGATGC 001680 001681 CACAATGCCA TTTGTAGGCT GGGCCCTGGG AGAAGAATAA CATCACCCAG TTCTGGGCCC AGCAATATGT TGTGATCCCA 001760 001761 ACTGGAAAAA GTTCCAGACA AGAGAGGAGA ATCACATCAT CATGATGATA AGCCAAGAGA TTTCACAATC CCCCCCTCTG 001840 001841 CACATGTCCC AGGCAGAAGA CCTGAATTAC CTTTTTACTT AGGCCAGTAG TGTCACAGTG CTTCCTCAGG GCAGGGCACA 001920 001921 AACAAGATAG GACAGTCACA TCATTAAGTG CTAGACTTAA TGCTAGATAT GTCATAACCT TACTTGTGGG CAGGATCCAG 002000 002001 GAAGGAGAGA TTTATGTCAC CTAGGTGCTC AGTAAAGAGA TATATTACAA TTACAATTCC TTTGAGGGAA GTGGCCAGGC 002080 002081 AAAATAGTCA CATCACCTAG GTGCTTGGCC CAGGTATAAG TCACAAGATA TCTGTGTGTT GAGCCCAGAA GGACTATCAA 002160 002161 ATTACGAAGT TTCTACGTAG AAGTGCATGT CACAGACACC TGCAGGAAGG CCCAGGAATG AGACTCCCAA TTCCACACAT 002240 002241 TTTCCCACTC CAAGTGTAAG AGTCAACAAC TCCTGAGACT TAGGCCCAAG TACATGAGTC ACAATCTCAA CAGTGGATTG 002320 002321 CATCCTGCCA TGAGAGCCCC AATCCCTTCT CTAAGCTGTG TTCCAGTAGA GGAGTCACAA CATCAATGGT GTGCTGAATC 002400 002401 CTGGTTGGAG AGTTCCCACT TCACCTGTGG ACTGGATCTG TATATGAGAG TCTCAATTCC AGCTCTCAAC TGCCCCTGGG 002480 002481 TGTGAGATTC AGGACCTCAA TTGTGAGCTG TGTACACATG GACATGTAAC AATTTCTACT TTTGGCTGTG TGTTCACACA 002560 002561 AGACTCAATC TCATCTGTGT TCTCGGCCCT GTTATGAGAC TCTCTGTACC ACCCACGGGA TTTATTCAAT ACGCATGGGT 002640 002641 GTCATAATCC TCTGTGATCT TCATACAAGT AGAAGACCCA GGACCTTACC CATGGCCCTA GGCCTATCTA TGAGAATTGA 002720 002721 CATTTTTCCT CACATTTTTA ATTTTAACAA ATAAGTTATT CTCCTCTCAG TTCAGATTCA TCAGGACATT GAATCATATT 002800 002801 CAGAAGAATT AAAACTGAAA GACTAATAGG TTTGTTAAAG CAATGCAGGT TGTCATACTA ATAAACCCTA AAATTTCAAA 002880 002881 GGCAAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT120968_smProtein_1346:1444 |
Length | 33 |
Molecular weight | 3721.2733 |
Aromaticity | 0.09375 |
Instability index | 62.90625 |
Isoelectric point | 10.1911010742 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0472909884675 |
Amino acid sequence | MRVISLGCWVSDTLQFLLWAGSRQQRRDTSPI |
Secondary structure | LEEEELLLLHHHHHHHHHHHLLHHHLLLLLLL |
PRMN | - |
PiMo | - |