NONHSAT121937
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT121937 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
976 nt |
Genomic location |
chr7-:90949443..90950418 |
Exon number |
1 |
Exons |
90949443..90950418 |
Genome context |
|
Sequence |
000001 TATATCCAAA GGCATGGAAT AAATGACTTT TATATTGGTG TGGTATTGTC TCTGAGCTCC AGCATTTTTA GTGGGGAGAA 000080
000081 GTACACTTTG AAATAAACAA AAACAAGGTC TCTTACCAGG ATAGGAACCA TGAAAGCAGA TCTAAGTGAC CATGCATATC 000160 000161 TAAAAGAATG GTTGTGGTGG GCCGGACTCT CAAGGGGAGC CAATGAGGTT GCCAACTTTA CTGCCTCTGG GCCAGCTGCC 000240 000241 TTAGCGCCTC CATTAGGAGC TCTCATTGTC CTTGTAAAGG TCTGCAGTTA CAGTCATTCA TCCTTCAAAA GGAGAGGACA 000320 000321 TAGAGACCTT ACATAAAATG TCTTGCAAGC TAGGTGATCC ACATTTTATG GTTTTTGTAA AACTTGTGGC CATTGTAGTC 000400 000401 TTGATTTAAT CTTGGTTTTA GGACTTCACC ACAAACTGAG CATTGTCTTT ACATAACCAT CTGCTCTGTA AGCAGAGCGT 000480 000481 TTTCAGTCTG CTATGTTAAA GGCCTGAGCA TTGTTTTAAA GAACTTTCTG CTGGAAAGTC TCTGCTGAGA CATCCCTTGG 000560 000561 CCTGGTTTCT GCTGCTAAGC CTCACAGTCT GTGTAAGCAC ACAGATTAAT TATTTAAACA GGGCCCTGGA CATATTGAAC 000640 000641 CCTTCTATAT AGCAACTTCA ATGTATTATG TGTTCTTTAA CATCAGTTTT AACTTACTCA GCTCTTTAAG AAGGGGCAAG 000720 000721 ATATGCCTGT CGATTACATT ATTGGTACTT TGAGTGTCTT CTTAGGATGT TTATGGGGAT GTCATTATTG CATGCCTTTA 000800 000801 AAGATGACTG TTTAGCAAAA TTTCCCATGT CTTTTTGAGA TGAAAAAGCA ATTAATGCAA TCTCTCTAAT ATTCTTAATA 000880 000881 TGTCTAATAT TATTAATAGC AACAAAGTTT AACTTGTAGA ACTGAACAAC AAACTGGTCA AAGTATCCCC CAAAAGAAAT 000960 000961 AAAAATCTGA TAGTTT |
Predicted Small Protein
Name | NONHSAT121937_smProtein_722:814 |
Length | 31 |
Molecular weight | 3392.1691 |
Aromaticity | 0.133333333333 |
Instability index | 91.8533333333 |
Isoelectric point | 6.48370361328 |
Runs | 6 |
Runs residual | 0.00225225225225 |
Runs probability | 0.0408496732027 |
Amino acid sequence | MPVDYIIGTLSVFLGCLWGCHYCMPLKMTV |
Secondary structure | LLLEEEEEHHHHHHLLLLLLLLLLLLLEEL |
PRMN | - |
PiMo | - |