NONHSAT123161
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT123161 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
716 nt |
Genomic location |
chr7+:127630999..127638129 |
Exon number |
2 |
Exons |
127630999..127631109,127637525..127638129 |
Genome context |
|
Sequence |
000001 GGCATTGAAT GCCCCAGAGG AGCCCGAAAC CTCCCAGGCT TGGTGCAGGA AGGAGAGCCC TTCAGCGAGG AAGCTACACT 000080
000081 TTTCACCAAG GAACTGGTGC TGCAGCGAGA GCTCCTGTGT CTGTTGTCTG ATTCCTGCTT CATCTGCTGT TTGATTTTTG 000160 000161 TGGGCCTTAC TTTTCCCATT TGCTCATGTA TGTCTATATT CCTATATCTA ATGTTTCTTA AAAGACAAAT CTGACTGTGT 000240 000241 AGGTGCATTT GTTTAAAAAA TATAACTCCC CATTGCCTCT GGGATAAAGT CTTATCTCAG TTTACATATA TTCTTGATAa 000320 000321 cctctccaac tttatgtctc accaccccca ctcacttcgt aattcgtgcc ttatcagaat ggacctgtta tactggcagt 000400 000401 tcaccatata taccattaca ttttgtttct cccatctctc aggtagactt acactttcgg cccagcacat cagtcatcgc 000480 000481 ccttgcttgc tttcctattc actcctgttc tggaaggtgc accacctttt cttggaaggc ttcccttgct ctcccaggct 000560 000561 agatgagatg tccttccatc agttcccaca gcaccctgtg catgtatctg ttgtgcactt accaatagta tacaagggat 000640 000641 ctatgaccca agtctctccc cactagcttg taagctcctc acagacagga accatgtttt gtctttgtac tccagt |
Predicted Small Protein
Name | NONHSAT123161_smProtein_8:130 |
Length | 41 |
Molecular weight | 4230.8195 |
Aromaticity | 0.05 |
Instability index | 71.015 |
Isoelectric point | 12.3042602539 |
Runs | 7 |
Runs residual | 0.00302419354839 |
Runs probability | 0.0453352512177 |
Amino acid sequence | MPQRSPKPPRLGAGRRALQRGSYTFHQGTGAAARAPVSVV |
Secondary structure | LLLLLLLLLLLLLHHHHHHLLLEEEELLLLLEEELLLLLL |
PRMN | - |
PiMo | - |