NONHSAT124702
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT124702 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
958 nt |
Genomic location |
chr8+:1983554..1988070 |
Exon number |
2 |
Exons |
1983554..1983730,1987290..1988070 |
Genome context |
|
Sequence |
000001 TAGACACATG ATAAATGACC GAAGTCTCGT ACTTTCCTCT CCTTGTGTGC ATTAGGTCTT TGTGGACTCA GTGGGAACTG 000080
000081 AGAACAATTC CATCCGTACG ACGTCCAGAT GAACCTTGCT GGTCGGAGAG GAAACTTCTG ACCACCCCGA GCTGAGCTTT 000160 000161 GTGTTCCTCA GGCCCCAAAA CACATTCtag gagaacatct ggatgacttt ctgtatggca atgacttttt agatataaca 000240 000241 cgaaaggcac aattgatgaa ataagtaatt gataagccag acatcaataa aattaaatat atctgctcta caaaagacaa 000320 000321 gatcaggaga atgggaaggc aagccacaga ctggaagaaa atacttgcaa atatacatct aataaagtat ggctgcccgc 000400 000401 agaactctta aatctcaaca atgagaaaag aaacaaccca atgaaaaaaa tgggcaaaag gcctggacag acaactcacc 000480 000481 aaagaataca caccattggc aaatGGAGAG TCTCCCTCgt ttaacatggc cccacctttc ttgggggtcc taaaccccaa 000560 000561 ctcaagagca ccagaaaccc accagcagct cttctttgct ttctcaccac tttttgcctt ctgctcatgg agtgctttga 000640 000641 ggtgaaacct ggtgctgaga tgtgggctct gatctttgag cctcccctct cttcaggatc ttggcctttc aaatcctgga 000720 000721 tgcACTGTCa ggcccagact ccaattctta tctctccagc ttcacagtat tgcaggaagc tctgctgttt ccccctgctt 000800 000801 ctcaacagcg gcactctTTC CTCTTCCTTA CCTTCAACCC AGCCACAAAT CGGCAAGAGC CCAGAGATAG AAAGTGATGT 000880 000881 GCAGAGAGAG TGCCCACTTC AGGAAGCACA ATTCTCACTA GGACTGGGCC TCGAACCACT GGCTGCTCTC ACAGCTCT |
Predicted Small Protein
Name | NONHSAT124702_smProtein_14:154 |
Length | 47 |
Molecular weight | 5522.383 |
Aromaticity | 0.108695652174 |
Instability index | 64.2956521739 |
Isoelectric point | 7.81292724609 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0248974464661 |
Amino acid sequence | MTEVSYFPLLVCIRSLWTQWELRTIPSVRRPDEPCWSERKLLTTPS |
Secondary structure | LEEEEEEEEEEEEELLHHHLHHHLLLLLLLLLLLLLLLHHHLLLLL |
PRMN | - |
PiMo | - |