NONHSAT125007
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125007 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
808 nt |
Genomic location |
chr8+:10417991..10418798 |
Exon number |
1 |
Exons |
10417991..10418798 |
Genome context |
|
Sequence |
000001 gcatacacca tcacacccag cctaacttCt tcagatttca ctggtttaca tgcctgtggg tgtgggtgtg tatcattctg 000080
000081 tgcaatttcc tcatgtgtgc agattcatgt gaccatcaca agtgacaaca gccaaaactg ctttatgacc acaggtcaat 000160 000161 gacatccctc attacccctc aggctccatc cccattccta accctgaaca gccactcatg ttctgcgtct ctaatgttga 000240 000241 tatttcaaga atgttattta gatggaatca cacattctcc aagaacattt ttgagactgg cttctttcaa tcagcatcat 000320 000321 tcccttgaga tcctcccaag ttgtcatgcg caacgagagt tcatcgtctt tgctgctgag caaacctccc tggcatggac 000400 000401 ggagcacagt ttgtttcacc ctcacccatg aaggaacatc cagattgttt ccagtttggg gctgtcccaa agaaagctgc 000480 000481 catgaacgtt caggtacagg ttttcatgtg aacataactt ttcatttctc tagaataaat gcccaagagc gcaaatgcta 000560 000561 gcttctgtga taattgcatt tcagttttat aagatacagc ctaactcttg tctaCAACAC ATGCCTATGT TGATGTTGTT 000640 000641 GCTTTTTGGT TTTGGGGGGC ATGttttgag acaatgtctc gctctgtctc tcaggctgga gtgtagttgt gtaatcatag 000720 000721 ctcactgcag cctcgaattc ctggactcaa gcaatcctcc cccttagctt cccaagtagc tgggaccatg gttgcatcac 000800 000801 tgtgccct |
Predicted Small Protein
Name | NONHSAT125007_smProtein_158:430 |
Length | 91 |
Molecular weight | 10174.4839 |
Aromaticity | 0.1 |
Instability index | 55.4233333333 |
Isoelectric point | 6.19232177734 |
Runs | 13 |
Runs residual | 0.00458553791887 |
Runs probability | 0.0439443968856 |
Amino acid sequence | MTSLITPQAPSPFLTLNSHSCSASLMLIFQECYLDGITHSPRTFLRLASFNQHHSLEILP SCHAQREFIVFAAEQTSLAWTEHSLFHPHP |
Secondary structure | LLLLLLLLLLLLLEELLLLHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHLLLLLEEELL LHHHHHHHHHHHHHHHLHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |