NONHSAT126057
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126057 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
989 nt |
Genomic location |
chr8+:37575097..37591274 |
Exon number |
3 |
Exons |
37575097..37575514,37584678..37584808,37590596..37591274 |
Genome context |
|
Sequence |
000001 AGAGTCCCAG GCAACAGGGA CAGAGAGACT GGCCCAGCAG GGGCTCTCTG GGCCAACTGA GCAAGGTGAC AGGGCCCAGG 000080
000081 AAAGGAGCTG TTGCCTGCAC AAGGGCAGAT GGAGTCAAGG AATCAGTGTT CATGGGATCC TGGCTGTCCC CACAGTGTCG 000160 000161 TGGCTGAACC TTACAAGAAC AGAAGCAAGT GAAGCACAGG TAGCCAGCCA CCTCAAGGGG GAAGTATTGA TAACGAAGGG 000240 000241 ACTCAAAGCA GCATAGACAT GGGATGCTGA GGGGCCAAGT GAGCAGAGCA GAGAGTGAGT GCTGCAAGTC CTCGGAGGGG 000320 000321 TCAACCGGGA CCCAAGCATC CAGAAAAGGC AGGGACCATG CAAAGGGGTC CGAAAAATGG GACCTTCAGT GGAAAGCACT 000400 000401 GAGAAGACCA TTATTCAGTC TCTGTGCCCA GAATCACTGT CTGCCAGGCT CTGGCCAACC TGTAGCCTCT CCGTGCTGAA 000480 000481 AACGACCCGC TAAAAAAGCC AAGAGGGAAG GACCCAGCAC ACAGCCGTGA ACCACATATA CACGAAGAGG GCCTAAAGTG 000560 000561 AAAAAGATAA ACTTTAAATC AAACGGAAAC TTTTTACAGC AACTTCCACT CTTGTGATAC TGAACTGAAC TGAAGCAGAA 000640 000641 GATTTTAAGA GTTGCCTGAA TCCTTTGGAC CTGCTTATTG GCTTAAAAAG TCTAATTGTG AAATTGACTT AAAAATTCCT 000720 000721 AATTGTGAAA GAAGGGGTCT CTTCTTTGGC ATGGCACTCT CACTAACAAT TTTCTTGGTA AGAGGACCCA ACAAACAGCA 000800 000801 ATAGAAATAG AAAACTATGG ATTGCTAGGT GAGAGTATTT TTTAACCTGC TTCAATCTAC AACTGCAAAA TGAACTGGCC 000880 000881 CAATTTAATT AGAAAAATTT CAGTTTCTGA CCACTGATCT ACATTACTGA AAGGTTACAT GTGAAATAAA TGTGGGGTGT 000960 000961 GTGTGAAAAA AAACAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT126057_smProtein_263:478 |
Length | 72 |
Molecular weight | 7702.6288 |
Aromaticity | 0.0422535211268 |
Instability index | 63.7084507042 |
Isoelectric point | 9.25982666016 |
Runs | 7 |
Runs residual | 0.0499629355078 |
Runs probability | 0.021487874429 |
Amino acid sequence | MLRGQVSRAESECCKSSEGSTGTQASRKGRDHAKGSEKWDLQWKALRRPLFSLCAQNHCL PGSGQPVASPC |
Secondary structure | LLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLHHHHHHLLLLL LLLLLLLLLLL |
PRMN | - |
PiMo | - |