NONHSAT126157
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT126157 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
488 nt |
Genomic location |
chr8+:39180080..39193012 |
Exon number |
5 |
Exons |
39180080..39180158,39180489..39180565,39181687..39181858,39182732..39182797,39192919..39193012 |
Genome context |
|
Sequence |
000001 ATCAATTTTA TCTTCAGCTT CTGTTATTAA TTCTTATGAC GAAAATGACA TCCGTCATTC CAAACCTCTG CTAGTTCAGA 000080
000081 TGGATTGCAA TTATAATGGA TATGTTGCGG GTATTCCAAA TTCTCTTGTG ACTCTCAGCG TATGTTCAGG ACTCAGGGGA 000160 000161 ACAATGCAGC TGAAAAACAT CTCATATGGA ATTGAACCGA TGGAGGCTGT ATCAGGATTT ATACACAAGA TTTATGAAGA 000240 000241 AAAATATGCT GACACTAATA TTCTCTTAGA AGAAAATGAC ACTTATACTT GGTTTAATTC AGAGTATCAA GTCAGAAAAA 000320 000321 GTTCAGAAAA AACTGACTTT ATTAAGTTAT TCCCTCGATA TATTGAAATG CATATTGTTG TGGACAAAAA TTTGGAGTGT 000400 000401 CAGCAGCTAT AGTGAAGTTT CAAGAAGGGG GAATGCTGTC GGGACTGAGC AGGCAATGGC Ctaaaaacaa taaaaagccc 000480 000481 tactaaaa |
Predicted Small Protein
Name | NONHSAT126157_smProtein_275:463 |
Length | 63 |
Molecular weight | 6944.1857 |
Aromaticity | 0.0645161290323 |
Instability index | 44.7193548387 |
Isoelectric point | 9.57989501953 |
Runs | 8 |
Runs residual | 0.0246082949309 |
Runs probability | 0.0207118883589 |
Amino acid sequence | MTLILGLIQSIKSEKVQKKLTLLSYSLDILKCILLWTKIWSVSSYSEVSRRGNAVGTEQA MA |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHLHHHHHHHHHHHHHEEEELLLEEELLLLLLLLLLL LL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL LL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooo oo |