NONHSAT127347
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127347 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
688 nt |
Genomic location |
chr8-:77900128..77912466 |
Exon number |
2 |
Exons |
77900128..77900574,77912226..77912466 |
Genome context |
|
Sequence |
000001 GGCTTGTCGG CGTTCGCGGT TGTTTGGCCA TCCAGTGCCT TCAGCAGCGC CGCTAAAGCG CAGTTCTCGT TGGTGTAACT 000080
000081 TTTTCTTTTT TTTTTCAGCC ACTTCCGGCT CCTGCGTCGC TCCGGAAGCC TGCGAGTTCC GGAAGCCTTG GTAATCCAGA 000160 000161 TTCGGCTAGG AAAAGACAAG CTTTCCAGAG AATGTTTCAG AGAAAGTTAC GTGGAGCGTG GGCGTTTCGC AGACTCCTAA 000240 000241 Gtggtctgga acctaacctg cagtgtctct gaggtatgcc tgTTTTCTTA Tgtgattctg atgaagtcac aagtttgaaa 000320 000321 accactAGAC TAGAGGAGCA GAGACCACAG GACTGTGATG GTGAAGACCA CAGTTTAGAA GGATTAAAAG CCCAGAGATA 000400 000401 TATGTATCTT TATCATAGAC ACATATATCT GTTAGCAGTT AAAAACTACC AGAATAAGAT TACGTTGTTA CAAAGAAAGT 000480 000481 TGAATGTGTT ACAAATAGAC AAGATCTATC TTGTTTTAAA TCACTGCCTT CTTGATTTTA GCACTTATGT AGATCAAGTA 000560 000561 GATTTAAAAT AGATTAGTTT TACCAGAGGG GCATCAgact tctaaaattc tacccagatt ttttctgtca tatttacata 000640 000641 actgcctact gaacttttcc acttagatgt ctcataggat cctcagat |
Predicted Small Protein
Name | NONHSAT127347_smProtein_275:571 |
Length | 99 |
Molecular weight | 11662.3033 |
Aromaticity | 0.0918367346939 |
Instability index | 47.6693877551 |
Isoelectric point | 6.03277587891 |
Runs | 14 |
Runs residual | 0.00381460995613 |
Runs probability | 0.0319352966412 |
Amino acid sequence | MPVFLCDSDEVTSLKTTRLEEQRPQDCDGEDHSLEGLKAQRYMYLYHRHIYLLAVKNYQN KITLLQRKLNVLQIDKIYLVLNHCLLDFSTYVDQVDLK |
Secondary structure | LLEEEELLLLEEELLLLLHHHLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHLLEEEHHHHHHLLLLEEEEEEELL |
PRMN | - |
PiMo | - |