NONHSAT127801
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127801 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
901 nt |
Genomic location |
chr8+:95878965..95886813 |
Exon number |
6 |
Exons |
95878965..95879424,95879504..95879565,95880920..95881041,95884112..95884230,95885602..95885705,95886780..95886813 |
Genome context |
|
Sequence |
000001 CTTCATAATA GGGGCTAGAT GTGTGAAGCC TGGCTTTAAT TTTTGCTTAG TAGGATCAAT GTCATATTTA CTTATTGGAC 000080
000081 GTAACCTAGG TTTCACTCTT TGAACATTAT TTTAAGGGAT AAAAAGTTAC TTGAGAGTCA TGTGAGGAGT TGAGCGTGGA 000160 000161 GATAGCACCA TAAGCCAAAC ATTTATGCTA ATTTTATGTA AATTATGTGC TATGGTCCAC GCCCCGCCCC CACATGCGAT 000240 000241 TAAAAAGTTG ATTTTTAGTG TGCTAAAGCA CATGCTAAAA CAGATGCTAC ATTTTCAAAA GGCAAGGGTC TTTTAGAATG 000320 000321 CTTGATGTCT GTGAGGTTGA CAGGAGCAAT ATTAAATAAA TATACATACA CTGTTTAAGG ATTCTGTGTT TTCTTTCTCA 000400 000401 TAGGAACCAC TCGTTTTGAC TATTATTTTA TCACTCTTTG TGAAACTTCA CAATGTTCGG GAGGACATTG TGAATGATAT 000480 000481 TACAGCTGAA CACATTTCTA TTTGGCCATC TTCCATTCCC AAacatcacg ttgctttgtc gcccaggctg gagtgcagtg 000560 000561 gtgaggtctc agctcactgc aacctacgcc tgcaaggttc aagcgattct catgcctcag cctgccaagt atctgggatt 000640 000641 acagCCTCCA GTCTGTGGAC TTTGAAGCTG TGGCAATCAC AGTGAAAGAG CTAGTTCGAT ATACACTCAG TATAAATCCA 000720 000721 AATAACCATT CTTGGTTAAT TATCCAGGCA GATATTTACT TTGCAACGAA TCAGTATTCA GCAGCTCTTC ACTATTACCT 000800 000801 CCAGGCAGGA GCTGTGTGTT CTGACTTCTT TAACAAGGCT GTGCCCCCTG ATGTTTATAC AGACCAGGTA ATAAAACGAA 000880 000881 TGATAAAATG TTGTTCTTTG C |
Predicted Small Protein
Name | NONHSAT127801_smProtein_473:664 |
Length | 64 |
Molecular weight | 6941.3219 |
Aromaticity | 0.0952380952381 |
Instability index | 92.8126984127 |
Isoelectric point | 9.41729736328 |
Runs | 12 |
Runs residual | 0.0455134434726 |
Runs probability | 0.047076488253 |
Amino acid sequence | MILQLNTFLFGHLPFPNITLLCRPGWSAVVRSQLTATYACKVQAILMPQPAKYLGLQPPV CGL |
Secondary structure | LEEEHHHHHHLLLLLLLEEEEELLLLLEEEHHHHHHHHHHHHHHEELLLLHHHLLLLLLL LLL |
PRMN | - |
PiMo | - |