NONHSAT127929
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT127929 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1016 nt |
Genomic location |
chr8-:99607105..99614410 |
Exon number |
3 |
Exons |
99607105..99607978,99608260..99608397,99614407..99614410 |
Genome context |
|
Sequence |
000001 TCAGGCTATT TTTATGATTC CCACAAATCC ACCACCAACA TTCAGAAAGC CAGAACTTTG GTCCGATGAT TTCACCGATT 000080
000081 TTGTTAAAAA GTGTTTGGTG AAGAATCCTG AGCAGAGAGC TACTGCAACA CAACTTTTAC AGCATTTATC CTTTGACTTT 000160 000161 TTGCTCCACC ATAAAATATG TAAGTACAAG ATCCCTGGAC TCCTTGAAGA GATTATCACG TTGTAAATAT CAGTTACAGG 000240 000241 ATTATCTAAA TGAAGAGCTT CAGAGTTTCA ATTTTTTTTG ATAGAATAAT TGTAAGTAGA CTTTGTATCC AGAATGTCAG 000320 000321 TAGATTTTAA AATCTACCTT AAAATTTAAT GCAAATAGaa ataatttaat atttataata GGTGTTTGTG AATCTTAATT 000400 000401 TCCCCAACAG AATAGTCTTA GAACTTTCAG CTAATAATAA GTATGTCTCA CATTAACAAA ACTTGATATT TGCTAAATGA 000480 000481 TTTCTATTGT TAAGTGACAA AAGGATGAAA AACATGGTTC TTGTAAAAAG GGACTTCCCT GTCTCTAAAG GAACCATTGG 000560 000561 GTTaaaagaa caaaaaaaga aaaaaggaaa aaaaaaaaaa aGTAACTTTC CAAAGTCCCA TTTTTCCAAA AGGATGTATT 000640 000641 GAGgggtatg gaaaacaggc tcttaagtat aatgtttatt gttatgaaag tgtaacttgg tactcaatct ccatagatgc 000720 000721 cagtacagca atatctattt aaaataaaaa tccatatatt ctttgatcca acagttgcac ttctaggaat ttattctaca 000800 000801 gaaatattta accatgtgtg aaataacatg tgtaaaaata ttcgtagaac attgaaattg taaaagattg gaaagatcct 000880 000881 aaatgtctgt caacaagttg gaaacaattt aaagtacaAG AAAAAGAGTT ACTGGAAAAA TACACCTATG TACACACAAC 000960 000961 ATATATACAT ATCTTAATGC TTATAATGAA GTATCTCTGG AAAAATAAGC AAGAAA |
Predicted Small Protein
Name | NONHSAT127929_smProtein_716:820 |
Length | 35 |
Molecular weight | 4023.737 |
Aromaticity | 0.176470588235 |
Instability index | 48.8441176471 |
Isoelectric point | 6.69378662109 |
Runs | 9 |
Runs residual | 0.078555472822 |
Runs probability | 0.0511884433454 |
Amino acid sequence | MPVQQYLFKIKIHIFFDPTVALLGIYSTEIFNHV |
Secondary structure | LLHHHHHHHLLEEEEELLLHHHHHLHHHHHHLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLL |
PiMo | iiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooo |