NONHSAT128100
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT128100 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
972 nt |
Genomic location |
chr8-:103553392..103563312 |
Exon number |
2 |
Exons |
103553392..103553821,103562771..103563312 |
Genome context |
|
Sequence |
000001 GGCTGTTCGG GAACCTCATT TCTCTACTGG TTGGGGGTCC TGTCCTTAAG CTCCCATCTG TCAGTCCTCG GGGGCCTGTC 000080
000081 CTGGGGAACT ACCTCCCATC AACTACACCT TTGGTCTTGC ATCCAAGCCT CCGGATGTCT TGTCCCTGAG TGCTTCCCAA 000160 000161 ATGTTGGTCT TTGATGTTCT TGTAGCCAAC CGCCTGAAGA TGCTGGAAGC CAACTGCCTG AAACCCCCGC TTCGGCCAGT 000240 000241 TTCCTTTACT TTCTGTTCAG TTAACATCCT AGACCTCTGA TTCGGCCTCA GATTTGGCTC TCGGTGCCTC TACTCCTCTG 000320 000321 GTCCTTTCAC CTCAAACTGC GGTCCAGCTC TCGAGTCTCC CTTGTATGAA CTAGAGCTCA GGTATTGATG ACAagtggtt 000400 000401 ggatgtgaca ctggtgaggg agacaagggc caggtttgaa gggacctgta gccagactaa ggactctgaa ctttattttg 000480 000481 agCCCAACGA AGGATTGTTG ATTTTCTTTT CTTTTGTCAG AAGTGAGACA GCCACACTGA AGGCTTGCTT CCCTCCTGCT 000560 000561 CATAGAGAGC TGATAGCAAC AACCAAGGCT ACATGCTTCC TGAGTTACAG CTGATGAGAG ACTGTCCACT CCACAACTGT 000640 000641 CAGAGTCCTG AGCTTCATTC CGATTGCAAC CCTGCCGCAT GCTCACTCCT TACTACTGTG AAAGGTCATT GCTATCATTA 000720 000721 TGGTGCTCAG CGGGTCTTTA CTAATCTATT TACTCATACT TAAATGGAAA ATTTCAGAGT ATGTGTTTCC TCATGGTTCT 000800 000801 ATCTTTGGGA ACAAGTCTGA TGGCCACTGC CTTTCTCCCT GCCAGAGTCA GGATCTAGCA TCAGGGGTTT CCAGGGTTCC 000880 000881 CTGGGAGCAG ACGACTGTTG CCTAACAGCT ACGTGGCTAA CAGTACCACT GCCAGCAAGA ACACTCCTTT ACTTCACAGA 000960 000961 AGTCTCCCCC TT |
Predicted Small Protein
Name | NONHSAT128100_smProtein_719:904 |
Length | 62 |
Molecular weight | 6708.6927 |
Aromaticity | 0.0983606557377 |
Instability index | 47.7213114754 |
Isoelectric point | 6.69171142578 |
Runs | 12 |
Runs residual | 0.0439042773695 |
Runs probability | 0.0366101395513 |
Amino acid sequence | MVLSGSLLIYLLILKWKISEYVFPHGSIFGNKSDGHCLSPCQSQDLASGVSRVPWEQTTV A |
Secondary structure | LLLLHHHHHHHHHHHHHHHHEELLLLEEEELLLLLEELLLLLLHHHHLLLLLLLLLEEEE L |
PRMN | - |
PiMo | - |